Gene : Cagra.0210s0017 C. grandiflora v1.1
Defline:  (1 of 1) 3.2.1.82 - Exo-poly-alpha-galacturonosidase / Exopolygalacturanosidase Genomic Order:  17
Name:  ? Cagra.0210s0017 Secondary Identifier:  ? PAC:28908220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0210s0017 0.5kb upstream 0.5kb upstream 2356 true Scaffold210: 62855-65210 Capsella grandiflora
Cagra.0210s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold210: 64711-65210 Capsella grandiflora
Cagra.0210s0017 0.5kb downstream 0.5kb downstream 2356 true Scaffold210: 62355-64710 Capsella grandiflora
Cagra.0210s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold210: 62355-62854 Capsella grandiflora
Cagra.0210s0017 1.0kb upstream 1.0kb upstream 2856 true Scaffold210: 62855-65710 Capsella grandiflora
Cagra.0210s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold210: 64711-65710 Capsella grandiflora
Cagra.0210s0017 1.0kb downstream 1.0kb downstream 2856 true Scaffold210: 61855-64710 Capsella grandiflora
Cagra.0210s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold210: 61855-62854 Capsella grandiflora
Cagra.0210s0017 2.0kb upstream 2.0kb upstream 3856 true Scaffold210: 62855-66710 Capsella grandiflora
Cagra.0210s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold210: 64711-66710 Capsella grandiflora
Cagra.0210s0017 2.0kb downstream 2.0kb downstream 3856 true Scaffold210: 60855-64710 Capsella grandiflora
Cagra.0210s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold210: 60855-62854 Capsella grandiflora
Cagra.0210s0017 5.0kb upstream 5.0kb upstream 6816 true Scaffold210: 62855-69670 Capsella grandiflora
Cagra.0210s0017 5.0kb upstream 5.0kb upstream 4960 false Scaffold210: 64711-69670 Capsella grandiflora
Cagra.0210s0017 5.0kb downstream 5.0kb downstream 6856 true Scaffold210: 57855-64710 Capsella grandiflora
Cagra.0210s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold210: 57855-62854 Capsella grandiflora
Cagra.0210s0017 10.0kb upstream 10.0kb upstream 6816 true Scaffold210: 62855-69670 Capsella grandiflora
Cagra.0210s0017 10.0kb upstream 10.0kb upstream 4960 false Scaffold210: 64711-69670 Capsella grandiflora
Cagra.0210s0017 10.0kb downstream 10.0kb downstream 11856 true Scaffold210: 52855-64710 Capsella grandiflora
Cagra.0210s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold210: 52855-62854 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369434 5261 Brassicaceae View MSA
123829316 5264 Brassicales-Malvales View MSA
124344203 5266 SBM View MSA
124248778 5268 Malvidae View MSA
124067071 5270 Rosid View MSA
123738878 5271 Pentapetalae View MSA
122786031 5272 Eudicot View MSA
122041553 5273 Angiosperm View MSA
121343864 5274 Embryophyte View MSA
123425677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain