Gene : Cagra.0216s0017 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12741:SF16 - CALLOSE SYNTHASE 7-RELATED Genomic Order:  17
Name:  ? Cagra.0216s0017 Secondary Identifier:  ? PAC:28914372
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6773 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0216s0017 0.5kb upstream 0.5kb upstream 11529 true Scaffold216: 68068-79596 Capsella grandiflora
Cagra.0216s0017 0.5kb upstream 0.5kb upstream 500 false Scaffold216: 68068-68567 Capsella grandiflora
Cagra.0216s0017 0.5kb downstream 0.5kb downstream 11529 true Scaffold216: 68568-80096 Capsella grandiflora
Cagra.0216s0017 0.5kb downstream 0.5kb downstream 500 false Scaffold216: 79597-80096 Capsella grandiflora
Cagra.0216s0017 1.0kb upstream 1.0kb upstream 12029 true Scaffold216: 67568-79596 Capsella grandiflora
Cagra.0216s0017 1.0kb upstream 1.0kb upstream 1000 false Scaffold216: 67568-68567 Capsella grandiflora
Cagra.0216s0017 1.0kb downstream 1.0kb downstream 12029 true Scaffold216: 68568-80596 Capsella grandiflora
Cagra.0216s0017 1.0kb downstream 1.0kb downstream 1000 false Scaffold216: 79597-80596 Capsella grandiflora
Cagra.0216s0017 2.0kb upstream 2.0kb upstream 13029 true Scaffold216: 66568-79596 Capsella grandiflora
Cagra.0216s0017 2.0kb upstream 2.0kb upstream 2000 false Scaffold216: 66568-68567 Capsella grandiflora
Cagra.0216s0017 2.0kb downstream 2.0kb downstream 13029 true Scaffold216: 68568-81596 Capsella grandiflora
Cagra.0216s0017 2.0kb downstream 2.0kb downstream 2000 false Scaffold216: 79597-81596 Capsella grandiflora
Cagra.0216s0017 5.0kb upstream 5.0kb upstream 16029 true Scaffold216: 63568-79596 Capsella grandiflora
Cagra.0216s0017 5.0kb upstream 5.0kb upstream 5000 false Scaffold216: 63568-68567 Capsella grandiflora
Cagra.0216s0017 5.0kb downstream 5.0kb downstream 16029 true Scaffold216: 68568-84596 Capsella grandiflora
Cagra.0216s0017 5.0kb downstream 5.0kb downstream 5000 false Scaffold216: 79597-84596 Capsella grandiflora
Cagra.0216s0017 10.0kb upstream 10.0kb upstream 21029 true Scaffold216: 58568-79596 Capsella grandiflora
Cagra.0216s0017 10.0kb upstream 10.0kb upstream 10000 false Scaffold216: 58568-68567 Capsella grandiflora
Cagra.0216s0017 10.0kb downstream 10.0kb downstream 21029 true Scaffold216: 68568-89596 Capsella grandiflora
Cagra.0216s0017 10.0kb downstream 10.0kb downstream 10000 false Scaffold216: 79597-89596 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365522 5261 Brassicaceae View MSA
123839457 5264 Brassicales-Malvales View MSA
124345846 5266 SBM View MSA
124242779 5268 Malvidae View MSA
124067889 5270 Rosid View MSA
123736773 5271 Pentapetalae View MSA
122788622 5272 Eudicot View MSA
122042706 5273 Angiosperm View MSA
121310004 5274 Embryophyte View MSA
123428420 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain