Gene : Cagra.0430s0038 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11649//PTHR11649:SF60 - MSS1/TRME-RELATED GTP-BINDING PROTEIN Genomic Order:  38
Name:  ? Cagra.0430s0038 Secondary Identifier:  ? PAC:28917321
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0038 0.5kb upstream 0.5kb upstream 4877 true Scaffold430: 138191-143067 Capsella grandiflora
Cagra.0430s0038 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 138191-138690 Capsella grandiflora
Cagra.0430s0038 0.5kb downstream 0.5kb downstream 4877 true Scaffold430: 138691-143567 Capsella grandiflora
Cagra.0430s0038 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 143068-143567 Capsella grandiflora
Cagra.0430s0038 1.0kb upstream 1.0kb upstream 5377 true Scaffold430: 137691-143067 Capsella grandiflora
Cagra.0430s0038 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 137691-138690 Capsella grandiflora
Cagra.0430s0038 1.0kb downstream 1.0kb downstream 5377 true Scaffold430: 138691-144067 Capsella grandiflora
Cagra.0430s0038 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 143068-144067 Capsella grandiflora
Cagra.0430s0038 2.0kb upstream 2.0kb upstream 6377 true Scaffold430: 136691-143067 Capsella grandiflora
Cagra.0430s0038 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 136691-138690 Capsella grandiflora
Cagra.0430s0038 2.0kb downstream 2.0kb downstream 6377 true Scaffold430: 138691-145067 Capsella grandiflora
Cagra.0430s0038 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 143068-145067 Capsella grandiflora
Cagra.0430s0038 5.0kb upstream 5.0kb upstream 9377 true Scaffold430: 133691-143067 Capsella grandiflora
Cagra.0430s0038 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 133691-138690 Capsella grandiflora
Cagra.0430s0038 5.0kb downstream 5.0kb downstream 9377 true Scaffold430: 138691-148067 Capsella grandiflora
Cagra.0430s0038 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 143068-148067 Capsella grandiflora
Cagra.0430s0038 10.0kb upstream 10.0kb upstream 14377 true Scaffold430: 128691-143067 Capsella grandiflora
Cagra.0430s0038 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 128691-138690 Capsella grandiflora
Cagra.0430s0038 10.0kb downstream 10.0kb downstream 14377 true Scaffold430: 138691-153067 Capsella grandiflora
Cagra.0430s0038 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 143068-153067 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368542 5261 Brassicaceae View MSA
123830642 5264 Brassicales-Malvales View MSA
124350628 5266 SBM View MSA
124243586 5268 Malvidae View MSA
124068964 5270 Rosid View MSA
123747725 5271 Pentapetalae View MSA
122788660 5272 Eudicot View MSA
122045813 5273 Angiosperm View MSA
121347341 5274 Embryophyte View MSA
123428429 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain