Gene : Cagra.0430s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13009:SF8 - AHSA1 PROTEIN Genomic Order:  35
Name:  ? Cagra.0430s0035 Secondary Identifier:  ? PAC:28917373
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0035 0.5kb upstream 0.5kb upstream 2486 true Scaffold430: 129973-132458 Capsella grandiflora
Cagra.0430s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 129973-130472 Capsella grandiflora
Cagra.0430s0035 0.5kb downstream 0.5kb downstream 2486 true Scaffold430: 130473-132958 Capsella grandiflora
Cagra.0430s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 132459-132958 Capsella grandiflora
Cagra.0430s0035 1.0kb upstream 1.0kb upstream 2986 true Scaffold430: 129473-132458 Capsella grandiflora
Cagra.0430s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 129473-130472 Capsella grandiflora
Cagra.0430s0035 1.0kb downstream 1.0kb downstream 2986 true Scaffold430: 130473-133458 Capsella grandiflora
Cagra.0430s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 132459-133458 Capsella grandiflora
Cagra.0430s0035 2.0kb upstream 2.0kb upstream 3986 true Scaffold430: 128473-132458 Capsella grandiflora
Cagra.0430s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 128473-130472 Capsella grandiflora
Cagra.0430s0035 2.0kb downstream 2.0kb downstream 3986 true Scaffold430: 130473-134458 Capsella grandiflora
Cagra.0430s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 132459-134458 Capsella grandiflora
Cagra.0430s0035 5.0kb upstream 5.0kb upstream 6986 true Scaffold430: 125473-132458 Capsella grandiflora
Cagra.0430s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 125473-130472 Capsella grandiflora
Cagra.0430s0035 5.0kb downstream 5.0kb downstream 6986 true Scaffold430: 130473-137458 Capsella grandiflora
Cagra.0430s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 132459-137458 Capsella grandiflora
Cagra.0430s0035 10.0kb upstream 10.0kb upstream 11986 true Scaffold430: 120473-132458 Capsella grandiflora
Cagra.0430s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 120473-130472 Capsella grandiflora
Cagra.0430s0035 10.0kb downstream 10.0kb downstream 11986 true Scaffold430: 130473-142458 Capsella grandiflora
Cagra.0430s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 132459-142458 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364078 5261 Brassicaceae View MSA
123833704 5264 Brassicales-Malvales View MSA
124339593 5266 SBM View MSA
124237595 5268 Malvidae View MSA
124068494 5270 Rosid View MSA
123738281 5271 Pentapetalae View MSA
122785985 5272 Eudicot View MSA
122047142 5273 Angiosperm View MSA
121345580 5274 Embryophyte View MSA
123425106 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain