Gene : Cagra.0430s0050 C. grandiflora v1.1
Defline:  (1 of 5) PTHR12290 - CORNICHON-RELATED Genomic Order:  50
Name:  ? Cagra.0430s0050 Secondary Identifier:  ? PAC:28917379
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0050 0.5kb upstream 0.5kb upstream 1965 true Scaffold430: 176609-178573 Capsella grandiflora
Cagra.0430s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 176609-177108 Capsella grandiflora
Cagra.0430s0050 0.5kb downstream 0.5kb downstream 1965 true Scaffold430: 177109-179073 Capsella grandiflora
Cagra.0430s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 178574-179073 Capsella grandiflora
Cagra.0430s0050 1.0kb upstream 1.0kb upstream 2465 true Scaffold430: 176109-178573 Capsella grandiflora
Cagra.0430s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 176109-177108 Capsella grandiflora
Cagra.0430s0050 1.0kb downstream 1.0kb downstream 2465 true Scaffold430: 177109-179573 Capsella grandiflora
Cagra.0430s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 178574-179573 Capsella grandiflora
Cagra.0430s0050 2.0kb upstream 2.0kb upstream 3465 true Scaffold430: 175109-178573 Capsella grandiflora
Cagra.0430s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 175109-177108 Capsella grandiflora
Cagra.0430s0050 2.0kb downstream 2.0kb downstream 3465 true Scaffold430: 177109-180573 Capsella grandiflora
Cagra.0430s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 178574-180573 Capsella grandiflora
Cagra.0430s0050 5.0kb upstream 5.0kb upstream 6465 true Scaffold430: 172109-178573 Capsella grandiflora
Cagra.0430s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 172109-177108 Capsella grandiflora
Cagra.0430s0050 5.0kb downstream 5.0kb downstream 6465 true Scaffold430: 177109-183573 Capsella grandiflora
Cagra.0430s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 178574-183573 Capsella grandiflora
Cagra.0430s0050 10.0kb upstream 10.0kb upstream 11465 true Scaffold430: 167109-178573 Capsella grandiflora
Cagra.0430s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 167109-177108 Capsella grandiflora
Cagra.0430s0050 10.0kb downstream 10.0kb downstream 11465 true Scaffold430: 177109-188573 Capsella grandiflora
Cagra.0430s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 178574-188573 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376095 5261 Brassicaceae View MSA
123831337 5264 Brassicales-Malvales View MSA
124339876 5266 SBM View MSA
124242420 5268 Malvidae View MSA
124067439 5270 Rosid View MSA
123752732 5271 Pentapetalae View MSA
122796851 5272 Eudicot View MSA
122045878 5273 Angiosperm View MSA
121348735 5274 Embryophyte View MSA
123427918 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain