Gene : Cagra.0430s0062 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10516//PTHR10516:SF292 - PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Genomic Order:  62
Name:  ? Cagra.0430s0062 Secondary Identifier:  ? PAC:28917331
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0062 0.5kb upstream 0.5kb upstream 3939 true Scaffold430: 216284-220222 Capsella grandiflora
Cagra.0430s0062 0.5kb upstream 0.5kb upstream 60 false Scaffold430: 220163-220222 Capsella grandiflora
Cagra.0430s0062 0.5kb downstream 0.5kb downstream 4379 true Scaffold430: 215784-220162 Capsella grandiflora
Cagra.0430s0062 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 215784-216283 Capsella grandiflora
Cagra.0430s0062 1.0kb upstream 1.0kb upstream 3939 true Scaffold430: 216284-220222 Capsella grandiflora
Cagra.0430s0062 1.0kb upstream 1.0kb upstream 60 false Scaffold430: 220163-220222 Capsella grandiflora
Cagra.0430s0062 1.0kb downstream 1.0kb downstream 4879 true Scaffold430: 215284-220162 Capsella grandiflora
Cagra.0430s0062 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 215284-216283 Capsella grandiflora
Cagra.0430s0062 2.0kb upstream 2.0kb upstream 3939 true Scaffold430: 216284-220222 Capsella grandiflora
Cagra.0430s0062 2.0kb upstream 2.0kb upstream 60 false Scaffold430: 220163-220222 Capsella grandiflora
Cagra.0430s0062 2.0kb downstream 2.0kb downstream 5879 true Scaffold430: 214284-220162 Capsella grandiflora
Cagra.0430s0062 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 214284-216283 Capsella grandiflora
Cagra.0430s0062 5.0kb upstream 5.0kb upstream 3939 true Scaffold430: 216284-220222 Capsella grandiflora
Cagra.0430s0062 5.0kb upstream 5.0kb upstream 60 false Scaffold430: 220163-220222 Capsella grandiflora
Cagra.0430s0062 5.0kb downstream 5.0kb downstream 8879 true Scaffold430: 211284-220162 Capsella grandiflora
Cagra.0430s0062 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 211284-216283 Capsella grandiflora
Cagra.0430s0062 10.0kb upstream 10.0kb upstream 3939 true Scaffold430: 216284-220222 Capsella grandiflora
Cagra.0430s0062 10.0kb upstream 10.0kb upstream 60 false Scaffold430: 220163-220222 Capsella grandiflora
Cagra.0430s0062 10.0kb downstream 10.0kb downstream 13879 true Scaffold430: 206284-220162 Capsella grandiflora
Cagra.0430s0062 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 206284-216283 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366490 5261 Brassicaceae View MSA
123840631 5264 Brassicales-Malvales View MSA
124350785 5266 SBM View MSA
124248385 5268 Malvidae View MSA
124063880 5270 Rosid View MSA
123749293 5271 Pentapetalae View MSA
122796238 5272 Eudicot View MSA
122047643 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121346019 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain