Gene : Cagra.0430s0061 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33334:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  61
Name:  ? Cagra.0430s0061 Secondary Identifier:  ? PAC:28917393
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0061 0.5kb upstream 0.5kb upstream 2301 true Scaffold430: 213890-216190 Capsella grandiflora
Cagra.0430s0061 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 213890-214389 Capsella grandiflora
Cagra.0430s0061 0.5kb downstream 0.5kb downstream 2301 true Scaffold430: 214390-216690 Capsella grandiflora
Cagra.0430s0061 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 216191-216690 Capsella grandiflora
Cagra.0430s0061 1.0kb upstream 1.0kb upstream 2801 true Scaffold430: 213390-216190 Capsella grandiflora
Cagra.0430s0061 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 213390-214389 Capsella grandiflora
Cagra.0430s0061 1.0kb downstream 1.0kb downstream 2801 true Scaffold430: 214390-217190 Capsella grandiflora
Cagra.0430s0061 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 216191-217190 Capsella grandiflora
Cagra.0430s0061 2.0kb upstream 2.0kb upstream 3801 true Scaffold430: 212390-216190 Capsella grandiflora
Cagra.0430s0061 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 212390-214389 Capsella grandiflora
Cagra.0430s0061 2.0kb downstream 2.0kb downstream 3801 true Scaffold430: 214390-218190 Capsella grandiflora
Cagra.0430s0061 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 216191-218190 Capsella grandiflora
Cagra.0430s0061 5.0kb upstream 5.0kb upstream 6801 true Scaffold430: 209390-216190 Capsella grandiflora
Cagra.0430s0061 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 209390-214389 Capsella grandiflora
Cagra.0430s0061 5.0kb downstream 5.0kb downstream 5833 true Scaffold430: 214390-220222 Capsella grandiflora
Cagra.0430s0061 5.0kb downstream 5.0kb downstream 4032 false Scaffold430: 216191-220222 Capsella grandiflora
Cagra.0430s0061 10.0kb upstream 10.0kb upstream 11801 true Scaffold430: 204390-216190 Capsella grandiflora
Cagra.0430s0061 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 204390-214389 Capsella grandiflora
Cagra.0430s0061 10.0kb downstream 10.0kb downstream 5833 true Scaffold430: 214390-220222 Capsella grandiflora
Cagra.0430s0061 10.0kb downstream 10.0kb downstream 4032 false Scaffold430: 216191-220222 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367859 5261 Brassicaceae View MSA
123840813 5264 Brassicales-Malvales View MSA
124322787 5266 SBM View MSA
124248764 5268 Malvidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain