Gene : Cagra.0434s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10438:SF258 - THIOREDOXIN F1, CHLOROPLASTIC-RELATED Genomic Order:  6
Name:  ? Cagra.0434s0006 Secondary Identifier:  ? PAC:28897352
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0006 0.5kb upstream 0.5kb upstream 2130 true Scaffold434: 11589-13718 Capsella grandiflora
Cagra.0434s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 13219-13718 Capsella grandiflora
Cagra.0434s0006 0.5kb downstream 0.5kb downstream 2130 true Scaffold434: 11089-13218 Capsella grandiflora
Cagra.0434s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 11089-11588 Capsella grandiflora
Cagra.0434s0006 1.0kb upstream 1.0kb upstream 2630 true Scaffold434: 11589-14218 Capsella grandiflora
Cagra.0434s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 13219-14218 Capsella grandiflora
Cagra.0434s0006 1.0kb downstream 1.0kb downstream 2630 true Scaffold434: 10589-13218 Capsella grandiflora
Cagra.0434s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 10589-11588 Capsella grandiflora
Cagra.0434s0006 2.0kb upstream 2.0kb upstream 3630 true Scaffold434: 11589-15218 Capsella grandiflora
Cagra.0434s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 13219-15218 Capsella grandiflora
Cagra.0434s0006 2.0kb downstream 2.0kb downstream 3630 true Scaffold434: 9589-13218 Capsella grandiflora
Cagra.0434s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 9589-11588 Capsella grandiflora
Cagra.0434s0006 5.0kb upstream 5.0kb upstream 6630 true Scaffold434: 11589-18218 Capsella grandiflora
Cagra.0434s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 13219-18218 Capsella grandiflora
Cagra.0434s0006 5.0kb downstream 5.0kb downstream 6630 true Scaffold434: 6589-13218 Capsella grandiflora
Cagra.0434s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 6589-11588 Capsella grandiflora
Cagra.0434s0006 10.0kb upstream 10.0kb upstream 11630 true Scaffold434: 11589-23218 Capsella grandiflora
Cagra.0434s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 13219-23218 Capsella grandiflora
Cagra.0434s0006 10.0kb downstream 10.0kb downstream 11630 true Scaffold434: 1589-13218 Capsella grandiflora
Cagra.0434s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 1589-11588 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360949 5261 Brassicaceae View MSA
123836898 5264 Brassicales-Malvales View MSA
124348522 5266 SBM View MSA
124243481 5268 Malvidae View MSA
124067919 5270 Rosid View MSA
123743661 5271 Pentapetalae View MSA
122790409 5272 Eudicot View MSA
122043508 5273 Angiosperm View MSA
121348014 5274 Embryophyte View MSA
123427200 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain