Gene : Cagra.0434s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12506//PTHR12506:SF21 - PROTEIN PHOSPHATASE RELATED Genomic Order:  21
Name:  ? Cagra.0434s0021 Secondary Identifier:  ? PAC:28897385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0021 0.5kb upstream 0.5kb upstream 2891 true Scaffold434: 52328-55218 Capsella grandiflora
Cagra.0434s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 52328-52827 Capsella grandiflora
Cagra.0434s0021 0.5kb downstream 0.5kb downstream 2891 true Scaffold434: 52828-55718 Capsella grandiflora
Cagra.0434s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 55219-55718 Capsella grandiflora
Cagra.0434s0021 1.0kb upstream 1.0kb upstream 3391 true Scaffold434: 51828-55218 Capsella grandiflora
Cagra.0434s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 51828-52827 Capsella grandiflora
Cagra.0434s0021 1.0kb downstream 1.0kb downstream 3391 true Scaffold434: 52828-56218 Capsella grandiflora
Cagra.0434s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 55219-56218 Capsella grandiflora
Cagra.0434s0021 2.0kb upstream 2.0kb upstream 4391 true Scaffold434: 50828-55218 Capsella grandiflora
Cagra.0434s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 50828-52827 Capsella grandiflora
Cagra.0434s0021 2.0kb downstream 2.0kb downstream 4391 true Scaffold434: 52828-57218 Capsella grandiflora
Cagra.0434s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 55219-57218 Capsella grandiflora
Cagra.0434s0021 5.0kb upstream 5.0kb upstream 7391 true Scaffold434: 47828-55218 Capsella grandiflora
Cagra.0434s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 47828-52827 Capsella grandiflora
Cagra.0434s0021 5.0kb downstream 5.0kb downstream 7391 true Scaffold434: 52828-60218 Capsella grandiflora
Cagra.0434s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 55219-60218 Capsella grandiflora
Cagra.0434s0021 10.0kb upstream 10.0kb upstream 12391 true Scaffold434: 42828-55218 Capsella grandiflora
Cagra.0434s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 42828-52827 Capsella grandiflora
Cagra.0434s0021 10.0kb downstream 10.0kb downstream 12391 true Scaffold434: 52828-65218 Capsella grandiflora
Cagra.0434s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 55219-65218 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376999 5261 Brassicaceae View MSA
123841392 5264 Brassicales-Malvales View MSA
124351116 5266 SBM View MSA
124242906 5268 Malvidae View MSA
124062485 5270 Rosid View MSA
123742436 5271 Pentapetalae View MSA
122788272 5272 Eudicot View MSA
122047416 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain