Gene : Cagra.0434s0033 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22880:SF55 - PHD FINGER FAMILY PROTEIN Genomic Order:  33
Name:  ? Cagra.0434s0033 Secondary Identifier:  ? PAC:28897353
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0033 0.5kb upstream 0.5kb upstream 6819 true Scaffold434: 112241-119059 Capsella grandiflora
Cagra.0434s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 118560-119059 Capsella grandiflora
Cagra.0434s0033 0.5kb downstream 0.5kb downstream 6819 true Scaffold434: 111741-118559 Capsella grandiflora
Cagra.0434s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 111741-112240 Capsella grandiflora
Cagra.0434s0033 1.0kb upstream 1.0kb upstream 7319 true Scaffold434: 112241-119559 Capsella grandiflora
Cagra.0434s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 118560-119559 Capsella grandiflora
Cagra.0434s0033 1.0kb downstream 1.0kb downstream 7319 true Scaffold434: 111241-118559 Capsella grandiflora
Cagra.0434s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 111241-112240 Capsella grandiflora
Cagra.0434s0033 2.0kb upstream 2.0kb upstream 8319 true Scaffold434: 112241-120559 Capsella grandiflora
Cagra.0434s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 118560-120559 Capsella grandiflora
Cagra.0434s0033 2.0kb downstream 2.0kb downstream 8319 true Scaffold434: 110241-118559 Capsella grandiflora
Cagra.0434s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 110241-112240 Capsella grandiflora
Cagra.0434s0033 5.0kb upstream 5.0kb upstream 11319 true Scaffold434: 112241-123559 Capsella grandiflora
Cagra.0434s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 118560-123559 Capsella grandiflora
Cagra.0434s0033 5.0kb downstream 5.0kb downstream 11319 true Scaffold434: 107241-118559 Capsella grandiflora
Cagra.0434s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 107241-112240 Capsella grandiflora
Cagra.0434s0033 10.0kb upstream 10.0kb upstream 16319 true Scaffold434: 112241-128559 Capsella grandiflora
Cagra.0434s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 118560-128559 Capsella grandiflora
Cagra.0434s0033 10.0kb downstream 10.0kb downstream 16319 true Scaffold434: 102241-118559 Capsella grandiflora
Cagra.0434s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 102241-112240 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373449 5261 Brassicaceae View MSA
123835666 5264 Brassicales-Malvales View MSA
124349721 5266 SBM View MSA
124250039 5268 Malvidae View MSA
124073153 5270 Rosid View MSA
123746144 5271 Pentapetalae View MSA
122794175 5272 Eudicot View MSA
122049832 5273 Angiosperm View MSA
121311609 5274 Embryophyte View MSA
123348884 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain