Gene : Cagra.0434s0045 C. grandiflora v1.1
Defline:  (1 of 1) KOG2217 - U4/U6.U5 snRNP associated protein Genomic Order:  45
Name:  ? Cagra.0434s0045 Secondary Identifier:  ? PAC:28897383
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0434s0045 0.5kb upstream 0.5kb upstream 5659 true Scaffold434: 165947-171605 Capsella grandiflora
Cagra.0434s0045 0.5kb upstream 0.5kb upstream 500 false Scaffold434: 171106-171605 Capsella grandiflora
Cagra.0434s0045 0.5kb downstream 0.5kb downstream 5659 true Scaffold434: 165447-171105 Capsella grandiflora
Cagra.0434s0045 0.5kb downstream 0.5kb downstream 500 false Scaffold434: 165447-165946 Capsella grandiflora
Cagra.0434s0045 1.0kb upstream 1.0kb upstream 6159 true Scaffold434: 165947-172105 Capsella grandiflora
Cagra.0434s0045 1.0kb upstream 1.0kb upstream 1000 false Scaffold434: 171106-172105 Capsella grandiflora
Cagra.0434s0045 1.0kb downstream 1.0kb downstream 6159 true Scaffold434: 164947-171105 Capsella grandiflora
Cagra.0434s0045 1.0kb downstream 1.0kb downstream 1000 false Scaffold434: 164947-165946 Capsella grandiflora
Cagra.0434s0045 2.0kb upstream 2.0kb upstream 7159 true Scaffold434: 165947-173105 Capsella grandiflora
Cagra.0434s0045 2.0kb upstream 2.0kb upstream 2000 false Scaffold434: 171106-173105 Capsella grandiflora
Cagra.0434s0045 2.0kb downstream 2.0kb downstream 7159 true Scaffold434: 163947-171105 Capsella grandiflora
Cagra.0434s0045 2.0kb downstream 2.0kb downstream 2000 false Scaffold434: 163947-165946 Capsella grandiflora
Cagra.0434s0045 5.0kb upstream 5.0kb upstream 10159 true Scaffold434: 165947-176105 Capsella grandiflora
Cagra.0434s0045 5.0kb upstream 5.0kb upstream 5000 false Scaffold434: 171106-176105 Capsella grandiflora
Cagra.0434s0045 5.0kb downstream 5.0kb downstream 10159 true Scaffold434: 160947-171105 Capsella grandiflora
Cagra.0434s0045 5.0kb downstream 5.0kb downstream 5000 false Scaffold434: 160947-165946 Capsella grandiflora
Cagra.0434s0045 10.0kb upstream 10.0kb upstream 15159 true Scaffold434: 165947-181105 Capsella grandiflora
Cagra.0434s0045 10.0kb upstream 10.0kb upstream 10000 false Scaffold434: 171106-181105 Capsella grandiflora
Cagra.0434s0045 10.0kb downstream 10.0kb downstream 15159 true Scaffold434: 155947-171105 Capsella grandiflora
Cagra.0434s0045 10.0kb downstream 10.0kb downstream 10000 false Scaffold434: 155947-165946 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367136 5261 Brassicaceae View MSA
123834168 5264 Brassicales-Malvales View MSA
124342005 5266 SBM View MSA
124238371 5268 Malvidae View MSA
124062674 5270 Rosid View MSA
123746922 5271 Pentapetalae View MSA
122786640 5272 Eudicot View MSA
122041665 5273 Angiosperm View MSA
121345433 5274 Embryophyte View MSA
123424851 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain