Gene : Cagra.0418s0016 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31875:SF0 - PROTEIN DEHYDRATION-INDUCED 19-RELATED Genomic Order:  16
Name:  ? Cagra.0418s0016 Secondary Identifier:  ? PAC:28909253
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0418s0016 0.5kb upstream 0.5kb upstream 3336 true Scaffold418: 61784-65119 Capsella grandiflora
Cagra.0418s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold418: 61784-62283 Capsella grandiflora
Cagra.0418s0016 0.5kb downstream 0.5kb downstream 3336 true Scaffold418: 62284-65619 Capsella grandiflora
Cagra.0418s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold418: 65120-65619 Capsella grandiflora
Cagra.0418s0016 1.0kb upstream 1.0kb upstream 3836 true Scaffold418: 61284-65119 Capsella grandiflora
Cagra.0418s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold418: 61284-62283 Capsella grandiflora
Cagra.0418s0016 1.0kb downstream 1.0kb downstream 3836 true Scaffold418: 62284-66119 Capsella grandiflora
Cagra.0418s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold418: 65120-66119 Capsella grandiflora
Cagra.0418s0016 2.0kb upstream 2.0kb upstream 4836 true Scaffold418: 60284-65119 Capsella grandiflora
Cagra.0418s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold418: 60284-62283 Capsella grandiflora
Cagra.0418s0016 2.0kb downstream 2.0kb downstream 4836 true Scaffold418: 62284-67119 Capsella grandiflora
Cagra.0418s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold418: 65120-67119 Capsella grandiflora
Cagra.0418s0016 5.0kb upstream 5.0kb upstream 7836 true Scaffold418: 57284-65119 Capsella grandiflora
Cagra.0418s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold418: 57284-62283 Capsella grandiflora
Cagra.0418s0016 5.0kb downstream 5.0kb downstream 7836 true Scaffold418: 62284-70119 Capsella grandiflora
Cagra.0418s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold418: 65120-70119 Capsella grandiflora
Cagra.0418s0016 10.0kb upstream 10.0kb upstream 12836 true Scaffold418: 52284-65119 Capsella grandiflora
Cagra.0418s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold418: 52284-62283 Capsella grandiflora
Cagra.0418s0016 10.0kb downstream 10.0kb downstream 12836 true Scaffold418: 62284-75119 Capsella grandiflora
Cagra.0418s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold418: 65120-75119 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368652 5261 Brassicaceae View MSA
123840462 5264 Brassicales-Malvales View MSA
124351513 5266 SBM View MSA
124248070 5268 Malvidae View MSA
124071029 5270 Rosid View MSA
123742538 5271 Pentapetalae View MSA
122794267 5272 Eudicot View MSA
122043196 5273 Angiosperm View MSA
121347850 5274 Embryophyte View MSA
123380651 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain