Gene : Cagra.0426s0003 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31589:SF18 - T1N24.5 PROTEIN Genomic Order:  3
Name:  ? Cagra.0426s0003 Secondary Identifier:  ? PAC:28904385
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0426s0003 0.5kb upstream 0.5kb upstream 2313 true Scaffold426: 4473-6785 Capsella grandiflora
Cagra.0426s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold426: 4473-4972 Capsella grandiflora
Cagra.0426s0003 0.5kb downstream 0.5kb downstream 2313 true Scaffold426: 4973-7285 Capsella grandiflora
Cagra.0426s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold426: 6786-7285 Capsella grandiflora
Cagra.0426s0003 1.0kb upstream 1.0kb upstream 2813 true Scaffold426: 3973-6785 Capsella grandiflora
Cagra.0426s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold426: 3973-4972 Capsella grandiflora
Cagra.0426s0003 1.0kb downstream 1.0kb downstream 2813 true Scaffold426: 4973-7785 Capsella grandiflora
Cagra.0426s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold426: 6786-7785 Capsella grandiflora
Cagra.0426s0003 2.0kb upstream 2.0kb upstream 3813 true Scaffold426: 2973-6785 Capsella grandiflora
Cagra.0426s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold426: 2973-4972 Capsella grandiflora
Cagra.0426s0003 2.0kb downstream 2.0kb downstream 3813 true Scaffold426: 4973-8785 Capsella grandiflora
Cagra.0426s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold426: 6786-8785 Capsella grandiflora
Cagra.0426s0003 5.0kb upstream 5.0kb upstream 6785 true Scaffold426: 1-6785 Capsella grandiflora
Cagra.0426s0003 5.0kb upstream 5.0kb upstream 4972 false Scaffold426: 1-4972 Capsella grandiflora
Cagra.0426s0003 5.0kb downstream 5.0kb downstream 6813 true Scaffold426: 4973-11785 Capsella grandiflora
Cagra.0426s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold426: 6786-11785 Capsella grandiflora
Cagra.0426s0003 10.0kb upstream 10.0kb upstream 6785 true Scaffold426: 1-6785 Capsella grandiflora
Cagra.0426s0003 10.0kb upstream 10.0kb upstream 4972 false Scaffold426: 1-4972 Capsella grandiflora
Cagra.0426s0003 10.0kb downstream 10.0kb downstream 11813 true Scaffold426: 4973-16785 Capsella grandiflora
Cagra.0426s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold426: 6786-16785 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333750 5261 Brassicaceae Singleton cluster - no MSA
123774661 5264 Brassicales-Malvales Singleton cluster - no MSA
124349668 5266 SBM View MSA
124252619 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain