Gene : Cagra.0426s0002 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31589:SF18 - T1N24.5 PROTEIN Genomic Order:  2
Name:  ? Cagra.0426s0002 Secondary Identifier:  ? PAC:28904382
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0426s0002 0.5kb upstream 0.5kb upstream 1436 true Scaffold426: 2932-4367 Capsella grandiflora
Cagra.0426s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold426: 2932-3431 Capsella grandiflora
Cagra.0426s0002 0.5kb downstream 0.5kb downstream 1436 true Scaffold426: 3432-4867 Capsella grandiflora
Cagra.0426s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold426: 4368-4867 Capsella grandiflora
Cagra.0426s0002 1.0kb upstream 1.0kb upstream 1936 true Scaffold426: 2432-4367 Capsella grandiflora
Cagra.0426s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold426: 2432-3431 Capsella grandiflora
Cagra.0426s0002 1.0kb downstream 1.0kb downstream 1936 true Scaffold426: 3432-5367 Capsella grandiflora
Cagra.0426s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold426: 4368-5367 Capsella grandiflora
Cagra.0426s0002 2.0kb upstream 2.0kb upstream 2936 true Scaffold426: 1432-4367 Capsella grandiflora
Cagra.0426s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold426: 1432-3431 Capsella grandiflora
Cagra.0426s0002 2.0kb downstream 2.0kb downstream 2936 true Scaffold426: 3432-6367 Capsella grandiflora
Cagra.0426s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold426: 4368-6367 Capsella grandiflora
Cagra.0426s0002 5.0kb upstream 5.0kb upstream 4367 true Scaffold426: 1-4367 Capsella grandiflora
Cagra.0426s0002 5.0kb upstream 5.0kb upstream 3431 false Scaffold426: 1-3431 Capsella grandiflora
Cagra.0426s0002 5.0kb downstream 5.0kb downstream 5936 true Scaffold426: 3432-9367 Capsella grandiflora
Cagra.0426s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold426: 4368-9367 Capsella grandiflora
Cagra.0426s0002 10.0kb upstream 10.0kb upstream 4367 true Scaffold426: 1-4367 Capsella grandiflora
Cagra.0426s0002 10.0kb upstream 10.0kb upstream 3431 false Scaffold426: 1-3431 Capsella grandiflora
Cagra.0426s0002 10.0kb downstream 10.0kb downstream 10936 true Scaffold426: 3432-14367 Capsella grandiflora
Cagra.0426s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold426: 4368-14367 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338365 5261 Brassicaceae View MSA
123778948 5264 Brassicales-Malvales View MSA
124277282 5266 SBM View MSA
124250704 5268 Malvidae View MSA
124074283 5270 Rosid View MSA
123753303 5271 Pentapetalae View MSA
122796959 5272 Eudicot View MSA
122051639 5273 Angiosperm View MSA
121347802 5274 Embryophyte View MSA
123380632 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain