Gene : Cagra.0427s0001 C. grandiflora v1.1
Defline:  (1 of 8) PTHR36312:SF1 - PLANT THIONIN FAMILY PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.0427s0001 Secondary Identifier:  ? PAC:28897652
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0427s0001 0.5kb upstream 0.5kb upstream 1010 true Scaffold427: 413-1422 Capsella grandiflora
Cagra.0427s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold427: 923-1422 Capsella grandiflora
Cagra.0427s0001 0.5kb downstream 0.5kb downstream 922 true Scaffold427: 1-922 Capsella grandiflora
Cagra.0427s0001 0.5kb downstream 0.5kb downstream 412 false Scaffold427: 1-412 Capsella grandiflora
Cagra.0427s0001 1.0kb upstream 1.0kb upstream 1510 true Scaffold427: 413-1922 Capsella grandiflora
Cagra.0427s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold427: 923-1922 Capsella grandiflora
Cagra.0427s0001 1.0kb downstream 1.0kb downstream 922 true Scaffold427: 1-922 Capsella grandiflora
Cagra.0427s0001 1.0kb downstream 1.0kb downstream 412 false Scaffold427: 1-412 Capsella grandiflora
Cagra.0427s0001 2.0kb upstream 2.0kb upstream 2510 true Scaffold427: 413-2922 Capsella grandiflora
Cagra.0427s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold427: 923-2922 Capsella grandiflora
Cagra.0427s0001 2.0kb downstream 2.0kb downstream 922 true Scaffold427: 1-922 Capsella grandiflora
Cagra.0427s0001 2.0kb downstream 2.0kb downstream 412 false Scaffold427: 1-412 Capsella grandiflora
Cagra.0427s0001 5.0kb upstream 5.0kb upstream 5510 true Scaffold427: 413-5922 Capsella grandiflora
Cagra.0427s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold427: 923-5922 Capsella grandiflora
Cagra.0427s0001 5.0kb downstream 5.0kb downstream 922 true Scaffold427: 1-922 Capsella grandiflora
Cagra.0427s0001 5.0kb downstream 5.0kb downstream 412 false Scaffold427: 1-412 Capsella grandiflora
Cagra.0427s0001 10.0kb upstream 10.0kb upstream 10510 true Scaffold427: 413-10922 Capsella grandiflora
Cagra.0427s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold427: 923-10922 Capsella grandiflora
Cagra.0427s0001 10.0kb downstream 10.0kb downstream 922 true Scaffold427: 1-922 Capsella grandiflora
Cagra.0427s0001 10.0kb downstream 10.0kb downstream 412 false Scaffold427: 1-412 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122029035 5273 Angiosperm View MSA
122380397 5261 Brassicaceae View MSA
123839004 5264 Brassicales-Malvales View MSA
124350521 5266 SBM View MSA
124252249 5268 Malvidae View MSA
124064967 5270 Rosid View MSA
123741285 5271 Pentapetalae View MSA
122796871 5272 Eudicot View MSA
121298442 5274 Embryophyte View MSA
123336415 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain