Gene : Cagra.0430s0014 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11353:SF22 - T-COMPLEX PROTEIN 1 SUBUNIT ETA Genomic Order:  14
Name:  ? Cagra.0430s0014 Secondary Identifier:  ? PAC:28917343
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0014 0.5kb upstream 0.5kb upstream 4380 true Scaffold430: 38297-42676 Capsella grandiflora
Cagra.0430s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 38297-38796 Capsella grandiflora
Cagra.0430s0014 0.5kb downstream 0.5kb downstream 4380 true Scaffold430: 38797-43176 Capsella grandiflora
Cagra.0430s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 42677-43176 Capsella grandiflora
Cagra.0430s0014 1.0kb upstream 1.0kb upstream 4880 true Scaffold430: 37797-42676 Capsella grandiflora
Cagra.0430s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 37797-38796 Capsella grandiflora
Cagra.0430s0014 1.0kb downstream 1.0kb downstream 4880 true Scaffold430: 38797-43676 Capsella grandiflora
Cagra.0430s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 42677-43676 Capsella grandiflora
Cagra.0430s0014 2.0kb upstream 2.0kb upstream 5880 true Scaffold430: 36797-42676 Capsella grandiflora
Cagra.0430s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 36797-38796 Capsella grandiflora
Cagra.0430s0014 2.0kb downstream 2.0kb downstream 5880 true Scaffold430: 38797-44676 Capsella grandiflora
Cagra.0430s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 42677-44676 Capsella grandiflora
Cagra.0430s0014 5.0kb upstream 5.0kb upstream 8880 true Scaffold430: 33797-42676 Capsella grandiflora
Cagra.0430s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 33797-38796 Capsella grandiflora
Cagra.0430s0014 5.0kb downstream 5.0kb downstream 8880 true Scaffold430: 38797-47676 Capsella grandiflora
Cagra.0430s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 42677-47676 Capsella grandiflora
Cagra.0430s0014 10.0kb upstream 10.0kb upstream 13880 true Scaffold430: 28797-42676 Capsella grandiflora
Cagra.0430s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 28797-38796 Capsella grandiflora
Cagra.0430s0014 10.0kb downstream 10.0kb downstream 13880 true Scaffold430: 38797-52676 Capsella grandiflora
Cagra.0430s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 42677-52676 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376913 5261 Brassicaceae View MSA
123835088 5264 Brassicales-Malvales View MSA
124343760 5266 SBM View MSA
124238476 5268 Malvidae View MSA
124061820 5270 Rosid View MSA
123739325 5271 Pentapetalae View MSA
122789576 5272 Eudicot View MSA
122049781 5273 Angiosperm View MSA
121344001 5274 Embryophyte View MSA
123424590 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain