Gene : Cagra.0430s0019 C. grandiflora v1.1
Defline:  (1 of 2) PTHR24006:SF445 - UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 15 Genomic Order:  19
Name:  ? Cagra.0430s0019 Secondary Identifier:  ? PAC:28917344
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0019 0.5kb upstream 0.5kb upstream 9559 true Scaffold430: 56887-66445 Capsella grandiflora
Cagra.0430s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 65946-66445 Capsella grandiflora
Cagra.0430s0019 0.5kb downstream 0.5kb downstream 9559 true Scaffold430: 56387-65945 Capsella grandiflora
Cagra.0430s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 56387-56886 Capsella grandiflora
Cagra.0430s0019 1.0kb upstream 1.0kb upstream 10059 true Scaffold430: 56887-66945 Capsella grandiflora
Cagra.0430s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 65946-66945 Capsella grandiflora
Cagra.0430s0019 1.0kb downstream 1.0kb downstream 10059 true Scaffold430: 55887-65945 Capsella grandiflora
Cagra.0430s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 55887-56886 Capsella grandiflora
Cagra.0430s0019 2.0kb upstream 2.0kb upstream 11059 true Scaffold430: 56887-67945 Capsella grandiflora
Cagra.0430s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 65946-67945 Capsella grandiflora
Cagra.0430s0019 2.0kb downstream 2.0kb downstream 11059 true Scaffold430: 54887-65945 Capsella grandiflora
Cagra.0430s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 54887-56886 Capsella grandiflora
Cagra.0430s0019 5.0kb upstream 5.0kb upstream 14059 true Scaffold430: 56887-70945 Capsella grandiflora
Cagra.0430s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 65946-70945 Capsella grandiflora
Cagra.0430s0019 5.0kb downstream 5.0kb downstream 14059 true Scaffold430: 51887-65945 Capsella grandiflora
Cagra.0430s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 51887-56886 Capsella grandiflora
Cagra.0430s0019 10.0kb upstream 10.0kb upstream 19059 true Scaffold430: 56887-75945 Capsella grandiflora
Cagra.0430s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 65946-75945 Capsella grandiflora
Cagra.0430s0019 10.0kb downstream 10.0kb downstream 19059 true Scaffold430: 46887-65945 Capsella grandiflora
Cagra.0430s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 46887-56886 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369567 5261 Brassicaceae View MSA
123841260 5264 Brassicales-Malvales View MSA
124343034 5266 SBM View MSA
124243207 5268 Malvidae View MSA
124072091 5270 Rosid View MSA
123746914 5271 Pentapetalae View MSA
122788764 5272 Eudicot View MSA
122042201 5273 Angiosperm View MSA
121346231 5274 Embryophyte View MSA
123427549 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain