Gene : Cagra.0430s0022 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11205:SF24 - 40S RIBOSOMAL PROTEIN S5-1-RELATED Genomic Order:  22
Name:  ? Cagra.0430s0022 Secondary Identifier:  ? PAC:28917356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0022 0.5kb upstream 0.5kb upstream 2159 true Scaffold430: 73914-76072 Capsella grandiflora
Cagra.0430s0022 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 75573-76072 Capsella grandiflora
Cagra.0430s0022 0.5kb downstream 0.5kb downstream 2159 true Scaffold430: 73414-75572 Capsella grandiflora
Cagra.0430s0022 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 73414-73913 Capsella grandiflora
Cagra.0430s0022 1.0kb upstream 1.0kb upstream 2659 true Scaffold430: 73914-76572 Capsella grandiflora
Cagra.0430s0022 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 75573-76572 Capsella grandiflora
Cagra.0430s0022 1.0kb downstream 1.0kb downstream 2659 true Scaffold430: 72914-75572 Capsella grandiflora
Cagra.0430s0022 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 72914-73913 Capsella grandiflora
Cagra.0430s0022 2.0kb upstream 2.0kb upstream 3659 true Scaffold430: 73914-77572 Capsella grandiflora
Cagra.0430s0022 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 75573-77572 Capsella grandiflora
Cagra.0430s0022 2.0kb downstream 2.0kb downstream 3659 true Scaffold430: 71914-75572 Capsella grandiflora
Cagra.0430s0022 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 71914-73913 Capsella grandiflora
Cagra.0430s0022 5.0kb upstream 5.0kb upstream 6659 true Scaffold430: 73914-80572 Capsella grandiflora
Cagra.0430s0022 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 75573-80572 Capsella grandiflora
Cagra.0430s0022 5.0kb downstream 5.0kb downstream 6659 true Scaffold430: 68914-75572 Capsella grandiflora
Cagra.0430s0022 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 68914-73913 Capsella grandiflora
Cagra.0430s0022 10.0kb upstream 10.0kb upstream 11659 true Scaffold430: 73914-85572 Capsella grandiflora
Cagra.0430s0022 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 75573-85572 Capsella grandiflora
Cagra.0430s0022 10.0kb downstream 10.0kb downstream 11659 true Scaffold430: 63914-75572 Capsella grandiflora
Cagra.0430s0022 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 63914-73913 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381573 5261 Brassicaceae View MSA
123840434 5264 Brassicales-Malvales View MSA
124338311 5266 SBM View MSA
124246877 5268 Malvidae View MSA
124064641 5270 Rosid View MSA
123749742 5271 Pentapetalae View MSA
122785829 5272 Eudicot View MSA
122048966 5273 Angiosperm View MSA
121345669 5274 Embryophyte View MSA
123423957 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain