Gene : Cagra.0430s0031 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12897 - COLON CANCER-ASSOCIATED PROTEIN MIC1 Genomic Order:  31
Name:  ? Cagra.0430s0031 Secondary Identifier:  ? PAC:28917342
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0430s0031 0.5kb upstream 0.5kb upstream 4581 true Scaffold430: 112896-117476 Capsella grandiflora
Cagra.0430s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold430: 112896-113395 Capsella grandiflora
Cagra.0430s0031 0.5kb downstream 0.5kb downstream 4581 true Scaffold430: 113396-117976 Capsella grandiflora
Cagra.0430s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold430: 117477-117976 Capsella grandiflora
Cagra.0430s0031 1.0kb upstream 1.0kb upstream 5081 true Scaffold430: 112396-117476 Capsella grandiflora
Cagra.0430s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold430: 112396-113395 Capsella grandiflora
Cagra.0430s0031 1.0kb downstream 1.0kb downstream 5081 true Scaffold430: 113396-118476 Capsella grandiflora
Cagra.0430s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold430: 117477-118476 Capsella grandiflora
Cagra.0430s0031 2.0kb upstream 2.0kb upstream 6081 true Scaffold430: 111396-117476 Capsella grandiflora
Cagra.0430s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold430: 111396-113395 Capsella grandiflora
Cagra.0430s0031 2.0kb downstream 2.0kb downstream 6081 true Scaffold430: 113396-119476 Capsella grandiflora
Cagra.0430s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold430: 117477-119476 Capsella grandiflora
Cagra.0430s0031 5.0kb upstream 5.0kb upstream 9081 true Scaffold430: 108396-117476 Capsella grandiflora
Cagra.0430s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold430: 108396-113395 Capsella grandiflora
Cagra.0430s0031 5.0kb downstream 5.0kb downstream 9081 true Scaffold430: 113396-122476 Capsella grandiflora
Cagra.0430s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold430: 117477-122476 Capsella grandiflora
Cagra.0430s0031 10.0kb upstream 10.0kb upstream 14081 true Scaffold430: 103396-117476 Capsella grandiflora
Cagra.0430s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold430: 103396-113395 Capsella grandiflora
Cagra.0430s0031 10.0kb downstream 10.0kb downstream 14081 true Scaffold430: 113396-127476 Capsella grandiflora
Cagra.0430s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold430: 117477-127476 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376638 5261 Brassicaceae View MSA
123835997 5264 Brassicales-Malvales View MSA
124348783 5266 SBM View MSA
124250155 5268 Malvidae View MSA
124069294 5270 Rosid View MSA
123740632 5271 Pentapetalae View MSA
122785663 5272 Eudicot View MSA
122048416 5273 Angiosperm View MSA
121348965 5274 Embryophyte View MSA
123424129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain