Gene : Cagra.0402s0049 C. grandiflora v1.1
Defline:  (1 of 2) 1.1.99.35 - Soluble quinoprotein glucose dehydrogenase / Soluble glucose dehydrogenase Genomic Order:  49
Name:  ? Cagra.0402s0049 Secondary Identifier:  ? PAC:28908001
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora GLUCOSE1PMETAB-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0049 0.5kb upstream 0.5kb upstream 3658 true Scaffold402: 171906-175563 Capsella grandiflora
Cagra.0402s0049 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 175064-175563 Capsella grandiflora
Cagra.0402s0049 0.5kb downstream 0.5kb downstream 3658 true Scaffold402: 171406-175063 Capsella grandiflora
Cagra.0402s0049 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 171406-171905 Capsella grandiflora
Cagra.0402s0049 1.0kb upstream 1.0kb upstream 4158 true Scaffold402: 171906-176063 Capsella grandiflora
Cagra.0402s0049 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 175064-176063 Capsella grandiflora
Cagra.0402s0049 1.0kb downstream 1.0kb downstream 4158 true Scaffold402: 170906-175063 Capsella grandiflora
Cagra.0402s0049 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 170906-171905 Capsella grandiflora
Cagra.0402s0049 2.0kb upstream 2.0kb upstream 5158 true Scaffold402: 171906-177063 Capsella grandiflora
Cagra.0402s0049 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 175064-177063 Capsella grandiflora
Cagra.0402s0049 2.0kb downstream 2.0kb downstream 5158 true Scaffold402: 169906-175063 Capsella grandiflora
Cagra.0402s0049 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 169906-171905 Capsella grandiflora
Cagra.0402s0049 5.0kb upstream 5.0kb upstream 8158 true Scaffold402: 171906-180063 Capsella grandiflora
Cagra.0402s0049 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 175064-180063 Capsella grandiflora
Cagra.0402s0049 5.0kb downstream 5.0kb downstream 8158 true Scaffold402: 166906-175063 Capsella grandiflora
Cagra.0402s0049 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 166906-171905 Capsella grandiflora
Cagra.0402s0049 10.0kb upstream 10.0kb upstream 13158 true Scaffold402: 171906-185063 Capsella grandiflora
Cagra.0402s0049 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 175064-185063 Capsella grandiflora
Cagra.0402s0049 10.0kb downstream 10.0kb downstream 13158 true Scaffold402: 161906-175063 Capsella grandiflora
Cagra.0402s0049 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 161906-171905 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373045 5261 Brassicaceae View MSA
123834860 5264 Brassicales-Malvales View MSA
124342822 5266 SBM View MSA
124245672 5268 Malvidae View MSA
124061288 5270 Rosid View MSA
123749936 5271 Pentapetalae View MSA
122794140 5272 Eudicot View MSA
122045052 5273 Angiosperm View MSA
121344764 5274 Embryophyte View MSA
123380098 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain