Gene : Cagra.0407s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31846:SF13 - CRM FAMILY MEMBER 3A-RELATED Genomic Order:  2
Name:  ? Cagra.0407s0002 Secondary Identifier:  ? PAC:28907508
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0407s0002 0.5kb upstream 0.5kb upstream 5127 true Scaffold407: 3239-8365 Capsella grandiflora
Cagra.0407s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold407: 3239-3738 Capsella grandiflora
Cagra.0407s0002 0.5kb downstream 0.5kb downstream 5127 true Scaffold407: 3739-8865 Capsella grandiflora
Cagra.0407s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold407: 8366-8865 Capsella grandiflora
Cagra.0407s0002 1.0kb upstream 1.0kb upstream 5627 true Scaffold407: 2739-8365 Capsella grandiflora
Cagra.0407s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold407: 2739-3738 Capsella grandiflora
Cagra.0407s0002 1.0kb downstream 1.0kb downstream 5627 true Scaffold407: 3739-9365 Capsella grandiflora
Cagra.0407s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold407: 8366-9365 Capsella grandiflora
Cagra.0407s0002 2.0kb upstream 2.0kb upstream 6627 true Scaffold407: 1739-8365 Capsella grandiflora
Cagra.0407s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold407: 1739-3738 Capsella grandiflora
Cagra.0407s0002 2.0kb downstream 2.0kb downstream 6627 true Scaffold407: 3739-10365 Capsella grandiflora
Cagra.0407s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold407: 8366-10365 Capsella grandiflora
Cagra.0407s0002 5.0kb upstream 5.0kb upstream 8365 true Scaffold407: 1-8365 Capsella grandiflora
Cagra.0407s0002 5.0kb upstream 5.0kb upstream 3738 false Scaffold407: 1-3738 Capsella grandiflora
Cagra.0407s0002 5.0kb downstream 5.0kb downstream 9627 true Scaffold407: 3739-13365 Capsella grandiflora
Cagra.0407s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold407: 8366-13365 Capsella grandiflora
Cagra.0407s0002 10.0kb upstream 10.0kb upstream 8365 true Scaffold407: 1-8365 Capsella grandiflora
Cagra.0407s0002 10.0kb upstream 10.0kb upstream 3738 false Scaffold407: 1-3738 Capsella grandiflora
Cagra.0407s0002 10.0kb downstream 10.0kb downstream 14627 true Scaffold407: 3739-18365 Capsella grandiflora
Cagra.0407s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold407: 8366-18365 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360782 5261 Brassicaceae View MSA
123831913 5264 Brassicales-Malvales View MSA
124337421 5266 SBM View MSA
124237901 5268 Malvidae View MSA
124062496 5270 Rosid View MSA
123746950 5271 Pentapetalae View MSA
122786803 5272 Eudicot View MSA
122043214 5273 Angiosperm View MSA
121349891 5274 Embryophyte View MSA
123381486 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain