Gene : Cagra.0410s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10064:SF4 - 60S RIBOSOMAL PROTEIN L22-1-RELATED Genomic Order:  6
Name:  ? Cagra.0410s0006 Secondary Identifier:  ? PAC:28897907
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0410s0006 0.5kb upstream 0.5kb upstream 1802 true Scaffold410: 10029-11830 Capsella grandiflora
Cagra.0410s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold410: 11331-11830 Capsella grandiflora
Cagra.0410s0006 0.5kb downstream 0.5kb downstream 1802 true Scaffold410: 9529-11330 Capsella grandiflora
Cagra.0410s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold410: 9529-10028 Capsella grandiflora
Cagra.0410s0006 1.0kb upstream 1.0kb upstream 2302 true Scaffold410: 10029-12330 Capsella grandiflora
Cagra.0410s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold410: 11331-12330 Capsella grandiflora
Cagra.0410s0006 1.0kb downstream 1.0kb downstream 2302 true Scaffold410: 9029-11330 Capsella grandiflora
Cagra.0410s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold410: 9029-10028 Capsella grandiflora
Cagra.0410s0006 2.0kb upstream 2.0kb upstream 3302 true Scaffold410: 10029-13330 Capsella grandiflora
Cagra.0410s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold410: 11331-13330 Capsella grandiflora
Cagra.0410s0006 2.0kb downstream 2.0kb downstream 3302 true Scaffold410: 8029-11330 Capsella grandiflora
Cagra.0410s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold410: 8029-10028 Capsella grandiflora
Cagra.0410s0006 5.0kb upstream 5.0kb upstream 6302 true Scaffold410: 10029-16330 Capsella grandiflora
Cagra.0410s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold410: 11331-16330 Capsella grandiflora
Cagra.0410s0006 5.0kb downstream 5.0kb downstream 6302 true Scaffold410: 5029-11330 Capsella grandiflora
Cagra.0410s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold410: 5029-10028 Capsella grandiflora
Cagra.0410s0006 10.0kb upstream 10.0kb upstream 11302 true Scaffold410: 10029-21330 Capsella grandiflora
Cagra.0410s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold410: 11331-21330 Capsella grandiflora
Cagra.0410s0006 10.0kb downstream 10.0kb downstream 11302 true Scaffold410: 29-11330 Capsella grandiflora
Cagra.0410s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold410: 29-10028 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380330 5261 Brassicaceae View MSA
123840472 5264 Brassicales-Malvales View MSA
124339112 5266 SBM View MSA
124244109 5268 Malvidae View MSA
124073965 5270 Rosid View MSA
123748426 5271 Pentapetalae View MSA
122787714 5272 Eudicot View MSA
122045649 5273 Angiosperm View MSA
121348582 5274 Embryophyte View MSA
123423882 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain