Gene : Cagra.0417s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12565:SF77 - TRANSCRIPTION FACTOR AIG1-RELATED Genomic Order:  2
Name:  ? Cagra.0417s0002 Secondary Identifier:  ? PAC:28902599
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0417s0002 0.5kb upstream 0.5kb upstream 2333 true Scaffold417: 4975-7307 Capsella grandiflora
Cagra.0417s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold417: 6808-7307 Capsella grandiflora
Cagra.0417s0002 0.5kb downstream 0.5kb downstream 2333 true Scaffold417: 4475-6807 Capsella grandiflora
Cagra.0417s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold417: 4475-4974 Capsella grandiflora
Cagra.0417s0002 1.0kb upstream 1.0kb upstream 2833 true Scaffold417: 4975-7807 Capsella grandiflora
Cagra.0417s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold417: 6808-7807 Capsella grandiflora
Cagra.0417s0002 1.0kb downstream 1.0kb downstream 2833 true Scaffold417: 3975-6807 Capsella grandiflora
Cagra.0417s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold417: 3975-4974 Capsella grandiflora
Cagra.0417s0002 2.0kb upstream 2.0kb upstream 3833 true Scaffold417: 4975-8807 Capsella grandiflora
Cagra.0417s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold417: 6808-8807 Capsella grandiflora
Cagra.0417s0002 2.0kb downstream 2.0kb downstream 3833 true Scaffold417: 2975-6807 Capsella grandiflora
Cagra.0417s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold417: 2975-4974 Capsella grandiflora
Cagra.0417s0002 5.0kb upstream 5.0kb upstream 6833 true Scaffold417: 4975-11807 Capsella grandiflora
Cagra.0417s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold417: 6808-11807 Capsella grandiflora
Cagra.0417s0002 5.0kb downstream 5.0kb downstream 6807 true Scaffold417: 1-6807 Capsella grandiflora
Cagra.0417s0002 5.0kb downstream 5.0kb downstream 4974 false Scaffold417: 1-4974 Capsella grandiflora
Cagra.0417s0002 10.0kb upstream 10.0kb upstream 11833 true Scaffold417: 4975-16807 Capsella grandiflora
Cagra.0417s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold417: 6808-16807 Capsella grandiflora
Cagra.0417s0002 10.0kb downstream 10.0kb downstream 6807 true Scaffold417: 1-6807 Capsella grandiflora
Cagra.0417s0002 10.0kb downstream 10.0kb downstream 4974 false Scaffold417: 1-4974 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376376 5261 Brassicaceae View MSA
123801230 5264 Brassicales-Malvales View MSA
124298555 5266 SBM View MSA
124150173 5268 Malvidae View MSA
123875837 5270 Rosid View MSA
123459595 5271 Pentapetalae View MSA
122494985 5272 Eudicot View MSA
122048947 5273 Angiosperm View MSA
121351451 5274 Embryophyte View MSA
123428440 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain