Gene : Cagra.0450s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11679:SF3 - VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 45 Genomic Order:  23
Name:  ? Cagra.0450s0023 Secondary Identifier:  ? PAC:28913155
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0450s0023 0.5kb upstream 0.5kb upstream 4470 true Scaffold450: 97153-101622 Capsella grandiflora
Cagra.0450s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold450: 101123-101622 Capsella grandiflora
Cagra.0450s0023 0.5kb downstream 0.5kb downstream 4470 true Scaffold450: 96653-101122 Capsella grandiflora
Cagra.0450s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold450: 96653-97152 Capsella grandiflora
Cagra.0450s0023 1.0kb upstream 1.0kb upstream 4970 true Scaffold450: 97153-102122 Capsella grandiflora
Cagra.0450s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold450: 101123-102122 Capsella grandiflora
Cagra.0450s0023 1.0kb downstream 1.0kb downstream 4970 true Scaffold450: 96153-101122 Capsella grandiflora
Cagra.0450s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold450: 96153-97152 Capsella grandiflora
Cagra.0450s0023 2.0kb upstream 2.0kb upstream 5970 true Scaffold450: 97153-103122 Capsella grandiflora
Cagra.0450s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold450: 101123-103122 Capsella grandiflora
Cagra.0450s0023 2.0kb downstream 2.0kb downstream 5970 true Scaffold450: 95153-101122 Capsella grandiflora
Cagra.0450s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold450: 95153-97152 Capsella grandiflora
Cagra.0450s0023 5.0kb upstream 5.0kb upstream 8970 true Scaffold450: 97153-106122 Capsella grandiflora
Cagra.0450s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold450: 101123-106122 Capsella grandiflora
Cagra.0450s0023 5.0kb downstream 5.0kb downstream 8970 true Scaffold450: 92153-101122 Capsella grandiflora
Cagra.0450s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold450: 92153-97152 Capsella grandiflora
Cagra.0450s0023 10.0kb upstream 10.0kb upstream 13970 true Scaffold450: 97153-111122 Capsella grandiflora
Cagra.0450s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold450: 101123-111122 Capsella grandiflora
Cagra.0450s0023 10.0kb downstream 10.0kb downstream 13970 true Scaffold450: 87153-101122 Capsella grandiflora
Cagra.0450s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold450: 87153-97152 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372340 5261 Brassicaceae View MSA
123830189 5264 Brassicales-Malvales View MSA
124339762 5266 SBM View MSA
124239986 5268 Malvidae View MSA
124069104 5270 Rosid View MSA
123737015 5271 Pentapetalae View MSA
122795036 5272 Eudicot View MSA
122044775 5273 Angiosperm View MSA
121347331 5274 Embryophyte View MSA
123424934 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain