Gene : Cagra.0454s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10641:SF539 - MYB-LIKE DNA-BINDING DOMAIN PROTEIN Genomic Order:  3
Name:  ? Cagra.0454s0003 Secondary Identifier:  ? PAC:28909952
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0454s0003 0.5kb upstream 0.5kb upstream 1672 true Scaffold454: 11162-12833 Capsella grandiflora
Cagra.0454s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold454: 12334-12833 Capsella grandiflora
Cagra.0454s0003 0.5kb downstream 0.5kb downstream 1672 true Scaffold454: 10662-12333 Capsella grandiflora
Cagra.0454s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold454: 10662-11161 Capsella grandiflora
Cagra.0454s0003 1.0kb upstream 1.0kb upstream 2172 true Scaffold454: 11162-13333 Capsella grandiflora
Cagra.0454s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold454: 12334-13333 Capsella grandiflora
Cagra.0454s0003 1.0kb downstream 1.0kb downstream 2172 true Scaffold454: 10162-12333 Capsella grandiflora
Cagra.0454s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold454: 10162-11161 Capsella grandiflora
Cagra.0454s0003 2.0kb upstream 2.0kb upstream 3172 true Scaffold454: 11162-14333 Capsella grandiflora
Cagra.0454s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold454: 12334-14333 Capsella grandiflora
Cagra.0454s0003 2.0kb downstream 2.0kb downstream 3172 true Scaffold454: 9162-12333 Capsella grandiflora
Cagra.0454s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold454: 9162-11161 Capsella grandiflora
Cagra.0454s0003 5.0kb upstream 5.0kb upstream 6172 true Scaffold454: 11162-17333 Capsella grandiflora
Cagra.0454s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold454: 12334-17333 Capsella grandiflora
Cagra.0454s0003 5.0kb downstream 5.0kb downstream 6172 true Scaffold454: 6162-12333 Capsella grandiflora
Cagra.0454s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold454: 6162-11161 Capsella grandiflora
Cagra.0454s0003 10.0kb upstream 10.0kb upstream 11172 true Scaffold454: 11162-22333 Capsella grandiflora
Cagra.0454s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold454: 12334-22333 Capsella grandiflora
Cagra.0454s0003 10.0kb downstream 10.0kb downstream 11172 true Scaffold454: 1162-12333 Capsella grandiflora
Cagra.0454s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold454: 1162-11161 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122043277 5273 Angiosperm View MSA
122368195 5261 Brassicaceae View MSA
123839821 5264 Brassicales-Malvales View MSA
124337332 5266 SBM View MSA
124253161 5268 Malvidae View MSA
124064030 5270 Rosid View MSA
123744070 5271 Pentapetalae View MSA
122796745 5272 Eudicot View MSA
123429079 5275 Viridiplantae View MSA
121310099 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain