Gene : Cagra.0454s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR19957:SF116 - SYNTAXIN-32 Genomic Order:  8
Name:  ? Cagra.0454s0008 Secondary Identifier:  ? PAC:28909955
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0454s0008 0.5kb upstream 0.5kb upstream 2594 true Scaffold454: 43244-45837 Capsella grandiflora
Cagra.0454s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold454: 43244-43743 Capsella grandiflora
Cagra.0454s0008 0.5kb downstream 0.5kb downstream 2594 true Scaffold454: 43744-46337 Capsella grandiflora
Cagra.0454s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold454: 45838-46337 Capsella grandiflora
Cagra.0454s0008 1.0kb upstream 1.0kb upstream 3094 true Scaffold454: 42744-45837 Capsella grandiflora
Cagra.0454s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold454: 42744-43743 Capsella grandiflora
Cagra.0454s0008 1.0kb downstream 1.0kb downstream 3094 true Scaffold454: 43744-46837 Capsella grandiflora
Cagra.0454s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold454: 45838-46837 Capsella grandiflora
Cagra.0454s0008 2.0kb upstream 2.0kb upstream 4094 true Scaffold454: 41744-45837 Capsella grandiflora
Cagra.0454s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold454: 41744-43743 Capsella grandiflora
Cagra.0454s0008 2.0kb downstream 2.0kb downstream 4094 true Scaffold454: 43744-47837 Capsella grandiflora
Cagra.0454s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold454: 45838-47837 Capsella grandiflora
Cagra.0454s0008 5.0kb upstream 5.0kb upstream 7094 true Scaffold454: 38744-45837 Capsella grandiflora
Cagra.0454s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold454: 38744-43743 Capsella grandiflora
Cagra.0454s0008 5.0kb downstream 5.0kb downstream 7094 true Scaffold454: 43744-50837 Capsella grandiflora
Cagra.0454s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold454: 45838-50837 Capsella grandiflora
Cagra.0454s0008 10.0kb upstream 10.0kb upstream 12094 true Scaffold454: 33744-45837 Capsella grandiflora
Cagra.0454s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold454: 33744-43743 Capsella grandiflora
Cagra.0454s0008 10.0kb downstream 10.0kb downstream 12094 true Scaffold454: 43744-55837 Capsella grandiflora
Cagra.0454s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold454: 45838-55837 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376826 5261 Brassicaceae View MSA
123829076 5264 Brassicales-Malvales View MSA
124351306 5266 SBM View MSA
124241378 5268 Malvidae View MSA
124069963 5270 Rosid View MSA
123741703 5271 Pentapetalae View MSA
122789258 5272 Eudicot View MSA
122042790 5273 Angiosperm View MSA
121345451 5274 Embryophyte View MSA
123424461 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain