Gene : Cagra.0402s0007 C. grandiflora v1.1
Defline:  (1 of 4) 3.2.2.21 - DNA-3-methyladenine glycosylase II / DNA-3-methyladenine glycosidase II Genomic Order:  7
Name:  ? Cagra.0402s0007 Secondary Identifier:  ? PAC:28907940
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0007 0.5kb upstream 0.5kb upstream 2935 true Scaffold402: 21962-24896 Capsella grandiflora
Cagra.0402s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 24397-24896 Capsella grandiflora
Cagra.0402s0007 0.5kb downstream 0.5kb downstream 2935 true Scaffold402: 21462-24396 Capsella grandiflora
Cagra.0402s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 21462-21961 Capsella grandiflora
Cagra.0402s0007 1.0kb upstream 1.0kb upstream 3435 true Scaffold402: 21962-25396 Capsella grandiflora
Cagra.0402s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 24397-25396 Capsella grandiflora
Cagra.0402s0007 1.0kb downstream 1.0kb downstream 3435 true Scaffold402: 20962-24396 Capsella grandiflora
Cagra.0402s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 20962-21961 Capsella grandiflora
Cagra.0402s0007 2.0kb upstream 2.0kb upstream 4435 true Scaffold402: 21962-26396 Capsella grandiflora
Cagra.0402s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 24397-26396 Capsella grandiflora
Cagra.0402s0007 2.0kb downstream 2.0kb downstream 4435 true Scaffold402: 19962-24396 Capsella grandiflora
Cagra.0402s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 19962-21961 Capsella grandiflora
Cagra.0402s0007 5.0kb upstream 5.0kb upstream 7435 true Scaffold402: 21962-29396 Capsella grandiflora
Cagra.0402s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 24397-29396 Capsella grandiflora
Cagra.0402s0007 5.0kb downstream 5.0kb downstream 7435 true Scaffold402: 16962-24396 Capsella grandiflora
Cagra.0402s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 16962-21961 Capsella grandiflora
Cagra.0402s0007 10.0kb upstream 10.0kb upstream 12435 true Scaffold402: 21962-34396 Capsella grandiflora
Cagra.0402s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 24397-34396 Capsella grandiflora
Cagra.0402s0007 10.0kb downstream 10.0kb downstream 12435 true Scaffold402: 11962-24396 Capsella grandiflora
Cagra.0402s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 11962-21961 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027501 5273 Angiosperm View MSA
122377943 5261 Brassicaceae View MSA
123839711 5264 Brassicales-Malvales View MSA
124344726 5266 SBM View MSA
124243433 5268 Malvidae View MSA
124069073 5270 Rosid View MSA
123749896 5271 Pentapetalae View MSA
122796676 5272 Eudicot View MSA
121350563 5274 Embryophyte View MSA
123425595 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain