Gene : Cagra.0402s0013 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10174//PTHR10174:SF151 - RETINALDEHYDE BINDING PROTEIN-RELATED Genomic Order:  13
Name:  ? Cagra.0402s0013 Secondary Identifier:  ? PAC:28908006
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0013 0.5kb upstream 0.5kb upstream 2676 true Scaffold402: 44185-46860 Capsella grandiflora
Cagra.0402s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 46361-46860 Capsella grandiflora
Cagra.0402s0013 0.5kb downstream 0.5kb downstream 2676 true Scaffold402: 43685-46360 Capsella grandiflora
Cagra.0402s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 43685-44184 Capsella grandiflora
Cagra.0402s0013 1.0kb upstream 1.0kb upstream 3176 true Scaffold402: 44185-47360 Capsella grandiflora
Cagra.0402s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 46361-47360 Capsella grandiflora
Cagra.0402s0013 1.0kb downstream 1.0kb downstream 3176 true Scaffold402: 43185-46360 Capsella grandiflora
Cagra.0402s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 43185-44184 Capsella grandiflora
Cagra.0402s0013 2.0kb upstream 2.0kb upstream 4176 true Scaffold402: 44185-48360 Capsella grandiflora
Cagra.0402s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 46361-48360 Capsella grandiflora
Cagra.0402s0013 2.0kb downstream 2.0kb downstream 4176 true Scaffold402: 42185-46360 Capsella grandiflora
Cagra.0402s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 42185-44184 Capsella grandiflora
Cagra.0402s0013 5.0kb upstream 5.0kb upstream 7176 true Scaffold402: 44185-51360 Capsella grandiflora
Cagra.0402s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 46361-51360 Capsella grandiflora
Cagra.0402s0013 5.0kb downstream 5.0kb downstream 7176 true Scaffold402: 39185-46360 Capsella grandiflora
Cagra.0402s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 39185-44184 Capsella grandiflora
Cagra.0402s0013 10.0kb upstream 10.0kb upstream 12176 true Scaffold402: 44185-56360 Capsella grandiflora
Cagra.0402s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 46361-56360 Capsella grandiflora
Cagra.0402s0013 10.0kb downstream 10.0kb downstream 12176 true Scaffold402: 34185-46360 Capsella grandiflora
Cagra.0402s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 34185-44184 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368363 5261 Brassicaceae View MSA
123833912 5264 Brassicales-Malvales View MSA
124339104 5266 SBM View MSA
124250312 5268 Malvidae View MSA
124068737 5270 Rosid View MSA
123747971 5271 Pentapetalae View MSA
122789052 5272 Eudicot View MSA
122046588 5273 Angiosperm View MSA
121350309 5274 Embryophyte View MSA
123427540 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain