Gene : Cagra.0402s0028 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23084:SF119 - PROTEIN ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 Genomic Order:  28
Name:  ? Cagra.0402s0028 Secondary Identifier:  ? PAC:28907941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0028 0.5kb upstream 0.5kb upstream 5923 true Scaffold402: 101706-107628 Capsella grandiflora
Cagra.0402s0028 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 101706-102205 Capsella grandiflora
Cagra.0402s0028 0.5kb downstream 0.5kb downstream 5923 true Scaffold402: 102206-108128 Capsella grandiflora
Cagra.0402s0028 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 107629-108128 Capsella grandiflora
Cagra.0402s0028 1.0kb upstream 1.0kb upstream 6423 true Scaffold402: 101206-107628 Capsella grandiflora
Cagra.0402s0028 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 101206-102205 Capsella grandiflora
Cagra.0402s0028 1.0kb downstream 1.0kb downstream 6423 true Scaffold402: 102206-108628 Capsella grandiflora
Cagra.0402s0028 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 107629-108628 Capsella grandiflora
Cagra.0402s0028 2.0kb upstream 2.0kb upstream 7423 true Scaffold402: 100206-107628 Capsella grandiflora
Cagra.0402s0028 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 100206-102205 Capsella grandiflora
Cagra.0402s0028 2.0kb downstream 2.0kb downstream 7423 true Scaffold402: 102206-109628 Capsella grandiflora
Cagra.0402s0028 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 107629-109628 Capsella grandiflora
Cagra.0402s0028 5.0kb upstream 5.0kb upstream 10423 true Scaffold402: 97206-107628 Capsella grandiflora
Cagra.0402s0028 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 97206-102205 Capsella grandiflora
Cagra.0402s0028 5.0kb downstream 5.0kb downstream 10423 true Scaffold402: 102206-112628 Capsella grandiflora
Cagra.0402s0028 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 107629-112628 Capsella grandiflora
Cagra.0402s0028 10.0kb upstream 10.0kb upstream 15423 true Scaffold402: 92206-107628 Capsella grandiflora
Cagra.0402s0028 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 92206-102205 Capsella grandiflora
Cagra.0402s0028 10.0kb downstream 10.0kb downstream 15423 true Scaffold402: 102206-117628 Capsella grandiflora
Cagra.0402s0028 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 107629-117628 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370447 5261 Brassicaceae View MSA
123834300 5264 Brassicales-Malvales View MSA
124343799 5266 SBM View MSA
124240797 5268 Malvidae View MSA
124066570 5270 Rosid View MSA
123740102 5271 Pentapetalae View MSA
122787208 5272 Eudicot View MSA
122045531 5273 Angiosperm View MSA
121346964 5274 Embryophyte View MSA
123427675 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain