Gene : Cagra.0402s0023 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13286 - SAP30 Genomic Order:  23
Name:  ? Cagra.0402s0023 Secondary Identifier:  ? PAC:28907984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0023 0.5kb upstream 0.5kb upstream 2907 true Scaffold402: 81243-84149 Capsella grandiflora
Cagra.0402s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 81243-81742 Capsella grandiflora
Cagra.0402s0023 0.5kb downstream 0.5kb downstream 2907 true Scaffold402: 81743-84649 Capsella grandiflora
Cagra.0402s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 84150-84649 Capsella grandiflora
Cagra.0402s0023 1.0kb upstream 1.0kb upstream 3407 true Scaffold402: 80743-84149 Capsella grandiflora
Cagra.0402s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 80743-81742 Capsella grandiflora
Cagra.0402s0023 1.0kb downstream 1.0kb downstream 3407 true Scaffold402: 81743-85149 Capsella grandiflora
Cagra.0402s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 84150-85149 Capsella grandiflora
Cagra.0402s0023 2.0kb upstream 2.0kb upstream 4407 true Scaffold402: 79743-84149 Capsella grandiflora
Cagra.0402s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 79743-81742 Capsella grandiflora
Cagra.0402s0023 2.0kb downstream 2.0kb downstream 4407 true Scaffold402: 81743-86149 Capsella grandiflora
Cagra.0402s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 84150-86149 Capsella grandiflora
Cagra.0402s0023 5.0kb upstream 5.0kb upstream 7407 true Scaffold402: 76743-84149 Capsella grandiflora
Cagra.0402s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 76743-81742 Capsella grandiflora
Cagra.0402s0023 5.0kb downstream 5.0kb downstream 7407 true Scaffold402: 81743-89149 Capsella grandiflora
Cagra.0402s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 84150-89149 Capsella grandiflora
Cagra.0402s0023 10.0kb upstream 10.0kb upstream 12407 true Scaffold402: 71743-84149 Capsella grandiflora
Cagra.0402s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 71743-81742 Capsella grandiflora
Cagra.0402s0023 10.0kb downstream 10.0kb downstream 12407 true Scaffold402: 81743-94149 Capsella grandiflora
Cagra.0402s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 84150-94149 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379549 5261 Brassicaceae View MSA
123838017 5264 Brassicales-Malvales View MSA
124343590 5266 SBM View MSA
124253540 5268 Malvidae View MSA
124061386 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain