Gene : Cagra.0402s0036 C. grandiflora v1.1
Defline:  (1 of 2) 1.2.1.8 - Betaine-aldehyde dehydrogenase / Betaine aldehyde oxidase Genomic Order:  36
Name:  ? Cagra.0402s0036 Secondary Identifier:  ? PAC:28907925
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY1F-353 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0036 0.5kb upstream 0.5kb upstream 4224 true Scaffold402: 129294-133517 Capsella grandiflora
Cagra.0402s0036 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 129294-129793 Capsella grandiflora
Cagra.0402s0036 0.5kb downstream 0.5kb downstream 4224 true Scaffold402: 129794-134017 Capsella grandiflora
Cagra.0402s0036 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 133518-134017 Capsella grandiflora
Cagra.0402s0036 1.0kb upstream 1.0kb upstream 4724 true Scaffold402: 128794-133517 Capsella grandiflora
Cagra.0402s0036 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 128794-129793 Capsella grandiflora
Cagra.0402s0036 1.0kb downstream 1.0kb downstream 4724 true Scaffold402: 129794-134517 Capsella grandiflora
Cagra.0402s0036 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 133518-134517 Capsella grandiflora
Cagra.0402s0036 2.0kb upstream 2.0kb upstream 5724 true Scaffold402: 127794-133517 Capsella grandiflora
Cagra.0402s0036 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 127794-129793 Capsella grandiflora
Cagra.0402s0036 2.0kb downstream 2.0kb downstream 5724 true Scaffold402: 129794-135517 Capsella grandiflora
Cagra.0402s0036 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 133518-135517 Capsella grandiflora
Cagra.0402s0036 5.0kb upstream 5.0kb upstream 8724 true Scaffold402: 124794-133517 Capsella grandiflora
Cagra.0402s0036 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 124794-129793 Capsella grandiflora
Cagra.0402s0036 5.0kb downstream 5.0kb downstream 8724 true Scaffold402: 129794-138517 Capsella grandiflora
Cagra.0402s0036 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 133518-138517 Capsella grandiflora
Cagra.0402s0036 10.0kb upstream 10.0kb upstream 13724 true Scaffold402: 119794-133517 Capsella grandiflora
Cagra.0402s0036 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 119794-129793 Capsella grandiflora
Cagra.0402s0036 10.0kb downstream 10.0kb downstream 13724 true Scaffold402: 129794-143517 Capsella grandiflora
Cagra.0402s0036 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 133518-143517 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369399 5261 Brassicaceae View MSA
123836339 5264 Brassicales-Malvales View MSA
124345770 5266 SBM View MSA
124244269 5268 Malvidae View MSA
124063957 5270 Rosid View MSA
123742074 5271 Pentapetalae View MSA
122792963 5272 Eudicot View MSA
122042877 5273 Angiosperm View MSA
121345365 5274 Embryophyte View MSA
123427690 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain