Gene : Cagra.0402s0033 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33077:SF13 - PROTEIN TIFY 10A-RELATED Genomic Order:  33
Name:  ? Cagra.0402s0033 Secondary Identifier:  ? PAC:28908007
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0033 0.5kb upstream 0.5kb upstream 2472 true Scaffold402: 121413-123884 Capsella grandiflora
Cagra.0402s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 121413-121912 Capsella grandiflora
Cagra.0402s0033 0.5kb downstream 0.5kb downstream 2472 true Scaffold402: 121913-124384 Capsella grandiflora
Cagra.0402s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 123885-124384 Capsella grandiflora
Cagra.0402s0033 1.0kb upstream 1.0kb upstream 2972 true Scaffold402: 120913-123884 Capsella grandiflora
Cagra.0402s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 120913-121912 Capsella grandiflora
Cagra.0402s0033 1.0kb downstream 1.0kb downstream 2972 true Scaffold402: 121913-124884 Capsella grandiflora
Cagra.0402s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 123885-124884 Capsella grandiflora
Cagra.0402s0033 2.0kb upstream 2.0kb upstream 3972 true Scaffold402: 119913-123884 Capsella grandiflora
Cagra.0402s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 119913-121912 Capsella grandiflora
Cagra.0402s0033 2.0kb downstream 2.0kb downstream 3972 true Scaffold402: 121913-125884 Capsella grandiflora
Cagra.0402s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 123885-125884 Capsella grandiflora
Cagra.0402s0033 5.0kb upstream 5.0kb upstream 6972 true Scaffold402: 116913-123884 Capsella grandiflora
Cagra.0402s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 116913-121912 Capsella grandiflora
Cagra.0402s0033 5.0kb downstream 5.0kb downstream 6972 true Scaffold402: 121913-128884 Capsella grandiflora
Cagra.0402s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 123885-128884 Capsella grandiflora
Cagra.0402s0033 10.0kb upstream 10.0kb upstream 11972 true Scaffold402: 111913-123884 Capsella grandiflora
Cagra.0402s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 111913-121912 Capsella grandiflora
Cagra.0402s0033 10.0kb downstream 10.0kb downstream 11972 true Scaffold402: 121913-133884 Capsella grandiflora
Cagra.0402s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 123885-133884 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378841 5261 Brassicaceae View MSA
123802009 5264 Brassicales-Malvales View MSA
124350479 5266 SBM View MSA
124249932 5268 Malvidae View MSA
124071926 5270 Rosid View MSA
123747835 5271 Pentapetalae View MSA
122797679 5272 Eudicot View MSA
122046349 5273 Angiosperm View MSA
121349662 5274 Embryophyte View MSA
123381390 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain