Gene : Cagra.0402s0031 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21569:SF2 - 30S RIBOSOMAL PROTEIN S9, CHLOROPLASTIC Genomic Order:  31
Name:  ? Cagra.0402s0031 Secondary Identifier:  ? PAC:28907967
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0031 0.5kb upstream 0.5kb upstream 2116 true Scaffold402: 112106-114221 Capsella grandiflora
Cagra.0402s0031 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 112106-112605 Capsella grandiflora
Cagra.0402s0031 0.5kb downstream 0.5kb downstream 2116 true Scaffold402: 112606-114721 Capsella grandiflora
Cagra.0402s0031 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 114222-114721 Capsella grandiflora
Cagra.0402s0031 1.0kb upstream 1.0kb upstream 2616 true Scaffold402: 111606-114221 Capsella grandiflora
Cagra.0402s0031 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 111606-112605 Capsella grandiflora
Cagra.0402s0031 1.0kb downstream 1.0kb downstream 2616 true Scaffold402: 112606-115221 Capsella grandiflora
Cagra.0402s0031 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 114222-115221 Capsella grandiflora
Cagra.0402s0031 2.0kb upstream 2.0kb upstream 3616 true Scaffold402: 110606-114221 Capsella grandiflora
Cagra.0402s0031 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 110606-112605 Capsella grandiflora
Cagra.0402s0031 2.0kb downstream 2.0kb downstream 3616 true Scaffold402: 112606-116221 Capsella grandiflora
Cagra.0402s0031 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 114222-116221 Capsella grandiflora
Cagra.0402s0031 5.0kb upstream 5.0kb upstream 6616 true Scaffold402: 107606-114221 Capsella grandiflora
Cagra.0402s0031 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 107606-112605 Capsella grandiflora
Cagra.0402s0031 5.0kb downstream 5.0kb downstream 6616 true Scaffold402: 112606-119221 Capsella grandiflora
Cagra.0402s0031 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 114222-119221 Capsella grandiflora
Cagra.0402s0031 10.0kb upstream 10.0kb upstream 11616 true Scaffold402: 102606-114221 Capsella grandiflora
Cagra.0402s0031 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 102606-112605 Capsella grandiflora
Cagra.0402s0031 10.0kb downstream 10.0kb downstream 11616 true Scaffold402: 112606-124221 Capsella grandiflora
Cagra.0402s0031 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 114222-124221 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370868 5261 Brassicaceae View MSA
123828776 5264 Brassicales-Malvales View MSA
124340174 5266 SBM View MSA
124242148 5268 Malvidae View MSA
124063747 5270 Rosid View MSA
123737620 5271 Pentapetalae View MSA
122790532 5272 Eudicot View MSA
122043582 5273 Angiosperm View MSA
121345989 5274 Embryophyte View MSA
123426879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain