Gene : Cagra.0402s0039 C. grandiflora v1.1
Defline:  (1 of 6) PTHR26402:SF526 - TWO-COMPONENT RESPONSE REGULATOR ARR15-RELATED Genomic Order:  39
Name:  ? Cagra.0402s0039 Secondary Identifier:  ? PAC:28907942
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0039 0.5kb upstream 0.5kb upstream 2040 true Scaffold402: 138891-140930 Capsella grandiflora
Cagra.0402s0039 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 138891-139390 Capsella grandiflora
Cagra.0402s0039 0.5kb downstream 0.5kb downstream 2040 true Scaffold402: 139391-141430 Capsella grandiflora
Cagra.0402s0039 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 140931-141430 Capsella grandiflora
Cagra.0402s0039 1.0kb upstream 1.0kb upstream 2540 true Scaffold402: 138391-140930 Capsella grandiflora
Cagra.0402s0039 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 138391-139390 Capsella grandiflora
Cagra.0402s0039 1.0kb downstream 1.0kb downstream 2540 true Scaffold402: 139391-141930 Capsella grandiflora
Cagra.0402s0039 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 140931-141930 Capsella grandiflora
Cagra.0402s0039 2.0kb upstream 2.0kb upstream 3540 true Scaffold402: 137391-140930 Capsella grandiflora
Cagra.0402s0039 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 137391-139390 Capsella grandiflora
Cagra.0402s0039 2.0kb downstream 2.0kb downstream 3540 true Scaffold402: 139391-142930 Capsella grandiflora
Cagra.0402s0039 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 140931-142930 Capsella grandiflora
Cagra.0402s0039 5.0kb upstream 5.0kb upstream 6540 true Scaffold402: 134391-140930 Capsella grandiflora
Cagra.0402s0039 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 134391-139390 Capsella grandiflora
Cagra.0402s0039 5.0kb downstream 5.0kb downstream 6540 true Scaffold402: 139391-145930 Capsella grandiflora
Cagra.0402s0039 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 140931-145930 Capsella grandiflora
Cagra.0402s0039 10.0kb upstream 10.0kb upstream 11540 true Scaffold402: 129391-140930 Capsella grandiflora
Cagra.0402s0039 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 129391-139390 Capsella grandiflora
Cagra.0402s0039 10.0kb downstream 10.0kb downstream 11540 true Scaffold402: 139391-150930 Capsella grandiflora
Cagra.0402s0039 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 140931-150930 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360683 5261 Brassicaceae View MSA
123841422 5264 Brassicales-Malvales View MSA
124349643 5266 SBM View MSA
124251260 5268 Malvidae View MSA
124068460 5270 Rosid View MSA
123744932 5271 Pentapetalae View MSA
122791853 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain