Gene : Cagra.0402s0040 C. grandiflora v1.1
Defline:  (1 of 1) PF11910 - Cyanobacterial and plant NDH-1 subunit O (NdhO) Genomic Order:  40
Name:  ? Cagra.0402s0040 Secondary Identifier:  ? PAC:28907938
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0402s0040 0.5kb upstream 0.5kb upstream 1769 true Scaffold402: 140784-142552 Capsella grandiflora
Cagra.0402s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold402: 140784-141283 Capsella grandiflora
Cagra.0402s0040 0.5kb downstream 0.5kb downstream 1769 true Scaffold402: 141284-143052 Capsella grandiflora
Cagra.0402s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold402: 142553-143052 Capsella grandiflora
Cagra.0402s0040 1.0kb upstream 1.0kb upstream 2269 true Scaffold402: 140284-142552 Capsella grandiflora
Cagra.0402s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold402: 140284-141283 Capsella grandiflora
Cagra.0402s0040 1.0kb downstream 1.0kb downstream 2269 true Scaffold402: 141284-143552 Capsella grandiflora
Cagra.0402s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold402: 142553-143552 Capsella grandiflora
Cagra.0402s0040 2.0kb upstream 2.0kb upstream 3269 true Scaffold402: 139284-142552 Capsella grandiflora
Cagra.0402s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold402: 139284-141283 Capsella grandiflora
Cagra.0402s0040 2.0kb downstream 2.0kb downstream 3269 true Scaffold402: 141284-144552 Capsella grandiflora
Cagra.0402s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold402: 142553-144552 Capsella grandiflora
Cagra.0402s0040 5.0kb upstream 5.0kb upstream 6269 true Scaffold402: 136284-142552 Capsella grandiflora
Cagra.0402s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold402: 136284-141283 Capsella grandiflora
Cagra.0402s0040 5.0kb downstream 5.0kb downstream 6269 true Scaffold402: 141284-147552 Capsella grandiflora
Cagra.0402s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold402: 142553-147552 Capsella grandiflora
Cagra.0402s0040 10.0kb upstream 10.0kb upstream 11269 true Scaffold402: 131284-142552 Capsella grandiflora
Cagra.0402s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold402: 131284-141283 Capsella grandiflora
Cagra.0402s0040 10.0kb downstream 10.0kb downstream 11269 true Scaffold402: 141284-152552 Capsella grandiflora
Cagra.0402s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold402: 142553-152552 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377754 5261 Brassicaceae View MSA
123834713 5264 Brassicales-Malvales View MSA
124344713 5266 SBM View MSA
124240180 5268 Malvidae View MSA
124061930 5270 Rosid View MSA
123740594 5271 Pentapetalae View MSA
122785739 5272 Eudicot View MSA
122043742 5273 Angiosperm View MSA
121347549 5274 Embryophyte View MSA
123380569 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain