Gene : Cagra.0380s0041 C. grandiflora v1.1
Defline:  (1 of 2) PTHR20855:SF47 - EXPRESSED PROTEIN Genomic Order:  41
Name:  ? Cagra.0380s0041 Secondary Identifier:  ? PAC:28902131
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0041 0.5kb upstream 0.5kb upstream 2564 true Scaffold380: 159133-161696 Capsella grandiflora
Cagra.0380s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 159133-159632 Capsella grandiflora
Cagra.0380s0041 0.5kb downstream 0.5kb downstream 2564 true Scaffold380: 159633-162196 Capsella grandiflora
Cagra.0380s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 161697-162196 Capsella grandiflora
Cagra.0380s0041 1.0kb upstream 1.0kb upstream 3064 true Scaffold380: 158633-161696 Capsella grandiflora
Cagra.0380s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 158633-159632 Capsella grandiflora
Cagra.0380s0041 1.0kb downstream 1.0kb downstream 3064 true Scaffold380: 159633-162696 Capsella grandiflora
Cagra.0380s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 161697-162696 Capsella grandiflora
Cagra.0380s0041 2.0kb upstream 2.0kb upstream 4064 true Scaffold380: 157633-161696 Capsella grandiflora
Cagra.0380s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 157633-159632 Capsella grandiflora
Cagra.0380s0041 2.0kb downstream 2.0kb downstream 4064 true Scaffold380: 159633-163696 Capsella grandiflora
Cagra.0380s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 161697-163696 Capsella grandiflora
Cagra.0380s0041 5.0kb upstream 5.0kb upstream 7064 true Scaffold380: 154633-161696 Capsella grandiflora
Cagra.0380s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 154633-159632 Capsella grandiflora
Cagra.0380s0041 5.0kb downstream 5.0kb downstream 7064 true Scaffold380: 159633-166696 Capsella grandiflora
Cagra.0380s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 161697-166696 Capsella grandiflora
Cagra.0380s0041 10.0kb upstream 10.0kb upstream 12064 true Scaffold380: 149633-161696 Capsella grandiflora
Cagra.0380s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 149633-159632 Capsella grandiflora
Cagra.0380s0041 10.0kb downstream 10.0kb downstream 12064 true Scaffold380: 159633-171696 Capsella grandiflora
Cagra.0380s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 161697-171696 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378026 5261 Brassicaceae View MSA
123831286 5264 Brassicales-Malvales View MSA
124337236 5266 SBM View MSA
124242462 5268 Malvidae View MSA
124066963 5270 Rosid View MSA
123752354 5271 Pentapetalae View MSA
122795335 5272 Eudicot View MSA
122047253 5273 Angiosperm View MSA
121349872 5274 Embryophyte View MSA
123428275 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain