Gene : Cagra.0380s0040 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22884:SF285 - HISTONE-LYSINE N-METHYLTRANSFERASE ASHR3 Genomic Order:  40
Name:  ? Cagra.0380s0040 Secondary Identifier:  ? PAC:28902135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0040 0.5kb upstream 0.5kb upstream 3639 true Scaffold380: 154755-158393 Capsella grandiflora
Cagra.0380s0040 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 157894-158393 Capsella grandiflora
Cagra.0380s0040 0.5kb downstream 0.5kb downstream 3639 true Scaffold380: 154255-157893 Capsella grandiflora
Cagra.0380s0040 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 154255-154754 Capsella grandiflora
Cagra.0380s0040 1.0kb upstream 1.0kb upstream 4139 true Scaffold380: 154755-158893 Capsella grandiflora
Cagra.0380s0040 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 157894-158893 Capsella grandiflora
Cagra.0380s0040 1.0kb downstream 1.0kb downstream 4139 true Scaffold380: 153755-157893 Capsella grandiflora
Cagra.0380s0040 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 153755-154754 Capsella grandiflora
Cagra.0380s0040 2.0kb upstream 2.0kb upstream 5139 true Scaffold380: 154755-159893 Capsella grandiflora
Cagra.0380s0040 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 157894-159893 Capsella grandiflora
Cagra.0380s0040 2.0kb downstream 2.0kb downstream 5139 true Scaffold380: 152755-157893 Capsella grandiflora
Cagra.0380s0040 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 152755-154754 Capsella grandiflora
Cagra.0380s0040 5.0kb upstream 5.0kb upstream 8139 true Scaffold380: 154755-162893 Capsella grandiflora
Cagra.0380s0040 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 157894-162893 Capsella grandiflora
Cagra.0380s0040 5.0kb downstream 5.0kb downstream 8139 true Scaffold380: 149755-157893 Capsella grandiflora
Cagra.0380s0040 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 149755-154754 Capsella grandiflora
Cagra.0380s0040 10.0kb upstream 10.0kb upstream 13139 true Scaffold380: 154755-167893 Capsella grandiflora
Cagra.0380s0040 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 157894-167893 Capsella grandiflora
Cagra.0380s0040 10.0kb downstream 10.0kb downstream 13139 true Scaffold380: 144755-157893 Capsella grandiflora
Cagra.0380s0040 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 144755-154754 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364126 5261 Brassicaceae View MSA
123828579 5264 Brassicales-Malvales View MSA
124346585 5266 SBM View MSA
124237180 5268 Malvidae View MSA
124066283 5270 Rosid View MSA
123751966 5271 Pentapetalae View MSA
122790455 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain