Gene : Cagra.0380s0048 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31807:SF2 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8 Genomic Order:  48
Name:  ? Cagra.0380s0048 Secondary Identifier:  ? PAC:28902138
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0048 0.5kb upstream 0.5kb upstream 4746 true Scaffold380: 176303-181048 Capsella grandiflora
Cagra.0380s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 180549-181048 Capsella grandiflora
Cagra.0380s0048 0.5kb downstream 0.5kb downstream 4746 true Scaffold380: 175803-180548 Capsella grandiflora
Cagra.0380s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 175803-176302 Capsella grandiflora
Cagra.0380s0048 1.0kb upstream 1.0kb upstream 5246 true Scaffold380: 176303-181548 Capsella grandiflora
Cagra.0380s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 180549-181548 Capsella grandiflora
Cagra.0380s0048 1.0kb downstream 1.0kb downstream 5246 true Scaffold380: 175303-180548 Capsella grandiflora
Cagra.0380s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 175303-176302 Capsella grandiflora
Cagra.0380s0048 2.0kb upstream 2.0kb upstream 6246 true Scaffold380: 176303-182548 Capsella grandiflora
Cagra.0380s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 180549-182548 Capsella grandiflora
Cagra.0380s0048 2.0kb downstream 2.0kb downstream 6246 true Scaffold380: 174303-180548 Capsella grandiflora
Cagra.0380s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 174303-176302 Capsella grandiflora
Cagra.0380s0048 5.0kb upstream 5.0kb upstream 9246 true Scaffold380: 176303-185548 Capsella grandiflora
Cagra.0380s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 180549-185548 Capsella grandiflora
Cagra.0380s0048 5.0kb downstream 5.0kb downstream 9246 true Scaffold380: 171303-180548 Capsella grandiflora
Cagra.0380s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 171303-176302 Capsella grandiflora
Cagra.0380s0048 10.0kb upstream 10.0kb upstream 14246 true Scaffold380: 176303-190548 Capsella grandiflora
Cagra.0380s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 180549-190548 Capsella grandiflora
Cagra.0380s0048 10.0kb downstream 10.0kb downstream 14246 true Scaffold380: 166303-180548 Capsella grandiflora
Cagra.0380s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 166303-176302 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365889 5261 Brassicaceae View MSA
123839278 5264 Brassicales-Malvales View MSA
124340911 5266 SBM View MSA
124248091 5268 Malvidae View MSA
124066469 5270 Rosid View MSA
123747481 5271 Pentapetalae View MSA
122790294 5272 Eudicot View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain