Gene : Cagra.0380s0076 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Genomic Order:  76
Name:  ? Cagra.0380s0076 Secondary Identifier:  ? PAC:28902158
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ANAEROFRUCAT-PWY Capsella grandiflora pathologic  
Cgrandiflora ANAGLYCOLYSIS-PWY Capsella grandiflora pathologic  
Cgrandiflora GLUCOSE1PMETAB-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-621 Capsella grandiflora pathologic  
Cgrandiflora PWY-7238 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0076 0.5kb upstream 0.5kb upstream 4110 true Scaffold380: 277181-281290 Capsella grandiflora
Cagra.0380s0076 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 277181-277680 Capsella grandiflora
Cagra.0380s0076 0.5kb downstream 0.5kb downstream 4110 true Scaffold380: 277681-281790 Capsella grandiflora
Cagra.0380s0076 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 281291-281790 Capsella grandiflora
Cagra.0380s0076 1.0kb upstream 1.0kb upstream 4610 true Scaffold380: 276681-281290 Capsella grandiflora
Cagra.0380s0076 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 276681-277680 Capsella grandiflora
Cagra.0380s0076 1.0kb downstream 1.0kb downstream 4610 true Scaffold380: 277681-282290 Capsella grandiflora
Cagra.0380s0076 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 281291-282290 Capsella grandiflora
Cagra.0380s0076 2.0kb upstream 2.0kb upstream 5610 true Scaffold380: 275681-281290 Capsella grandiflora
Cagra.0380s0076 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 275681-277680 Capsella grandiflora
Cagra.0380s0076 2.0kb downstream 2.0kb downstream 5610 true Scaffold380: 277681-283290 Capsella grandiflora
Cagra.0380s0076 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 281291-283290 Capsella grandiflora
Cagra.0380s0076 5.0kb upstream 5.0kb upstream 8610 true Scaffold380: 272681-281290 Capsella grandiflora
Cagra.0380s0076 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 272681-277680 Capsella grandiflora
Cagra.0380s0076 5.0kb downstream 5.0kb downstream 8610 true Scaffold380: 277681-286290 Capsella grandiflora
Cagra.0380s0076 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 281291-286290 Capsella grandiflora
Cagra.0380s0076 10.0kb upstream 10.0kb upstream 13610 true Scaffold380: 267681-281290 Capsella grandiflora
Cagra.0380s0076 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 267681-277680 Capsella grandiflora
Cagra.0380s0076 10.0kb downstream 10.0kb downstream 13610 true Scaffold380: 277681-291290 Capsella grandiflora
Cagra.0380s0076 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 281291-291290 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370199 5261 Brassicaceae View MSA
123830240 5264 Brassicales-Malvales View MSA
124346939 5266 SBM View MSA
124240736 5268 Malvidae View MSA
124061792 5270 Rosid View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain