Gene : Cagra.0380s0087 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10217:SF544 - CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED Genomic Order:  87
Name:  ? Cagra.0380s0087 Secondary Identifier:  ? PAC:28902118
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0087 0.5kb upstream 0.5kb upstream 3971 true Scaffold380: 322136-326106 Capsella grandiflora
Cagra.0380s0087 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 322136-322635 Capsella grandiflora
Cagra.0380s0087 0.5kb downstream 0.5kb downstream 3971 true Scaffold380: 322636-326606 Capsella grandiflora
Cagra.0380s0087 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 326107-326606 Capsella grandiflora
Cagra.0380s0087 1.0kb upstream 1.0kb upstream 4471 true Scaffold380: 321636-326106 Capsella grandiflora
Cagra.0380s0087 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 321636-322635 Capsella grandiflora
Cagra.0380s0087 1.0kb downstream 1.0kb downstream 4471 true Scaffold380: 322636-327106 Capsella grandiflora
Cagra.0380s0087 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 326107-327106 Capsella grandiflora
Cagra.0380s0087 2.0kb upstream 2.0kb upstream 5471 true Scaffold380: 320636-326106 Capsella grandiflora
Cagra.0380s0087 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 320636-322635 Capsella grandiflora
Cagra.0380s0087 2.0kb downstream 2.0kb downstream 5471 true Scaffold380: 322636-328106 Capsella grandiflora
Cagra.0380s0087 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 326107-328106 Capsella grandiflora
Cagra.0380s0087 5.0kb upstream 5.0kb upstream 8471 true Scaffold380: 317636-326106 Capsella grandiflora
Cagra.0380s0087 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 317636-322635 Capsella grandiflora
Cagra.0380s0087 5.0kb downstream 5.0kb downstream 8471 true Scaffold380: 322636-331106 Capsella grandiflora
Cagra.0380s0087 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 326107-331106 Capsella grandiflora
Cagra.0380s0087 10.0kb upstream 10.0kb upstream 13471 true Scaffold380: 312636-326106 Capsella grandiflora
Cagra.0380s0087 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 312636-322635 Capsella grandiflora
Cagra.0380s0087 10.0kb downstream 10.0kb downstream 13471 true Scaffold380: 322636-336106 Capsella grandiflora
Cagra.0380s0087 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 326107-336106 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041490 5273 Angiosperm View MSA
122373142 5261 Brassicaceae View MSA
123828501 5264 Brassicales-Malvales View MSA
124340672 5266 SBM View MSA
124240070 5268 Malvidae View MSA
124073403 5270 Rosid View MSA
123747107 5271 Pentapetalae View MSA
122792156 5272 Eudicot View MSA
121351754 5274 Embryophyte View MSA
123428762 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain