Gene : Cagra.0381s0011 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10593:SF31 - C2H2-LIKE ZINC FINGER PROTEIN-RELATED Genomic Order:  11
Name:  ? Cagra.0381s0011 Secondary Identifier:  ? PAC:28893713
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0381s0011 0.5kb upstream 0.5kb upstream 3049 true Scaffold381: 67569-70617 Capsella grandiflora
Cagra.0381s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold381: 70118-70617 Capsella grandiflora
Cagra.0381s0011 0.5kb downstream 0.5kb downstream 3049 true Scaffold381: 67069-70117 Capsella grandiflora
Cagra.0381s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold381: 67069-67568 Capsella grandiflora
Cagra.0381s0011 1.0kb upstream 1.0kb upstream 3549 true Scaffold381: 67569-71117 Capsella grandiflora
Cagra.0381s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold381: 70118-71117 Capsella grandiflora
Cagra.0381s0011 1.0kb downstream 1.0kb downstream 3549 true Scaffold381: 66569-70117 Capsella grandiflora
Cagra.0381s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold381: 66569-67568 Capsella grandiflora
Cagra.0381s0011 2.0kb upstream 2.0kb upstream 4549 true Scaffold381: 67569-72117 Capsella grandiflora
Cagra.0381s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold381: 70118-72117 Capsella grandiflora
Cagra.0381s0011 2.0kb downstream 2.0kb downstream 4549 true Scaffold381: 65569-70117 Capsella grandiflora
Cagra.0381s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold381: 65569-67568 Capsella grandiflora
Cagra.0381s0011 5.0kb upstream 5.0kb upstream 7549 true Scaffold381: 67569-75117 Capsella grandiflora
Cagra.0381s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold381: 70118-75117 Capsella grandiflora
Cagra.0381s0011 5.0kb downstream 5.0kb downstream 7549 true Scaffold381: 62569-70117 Capsella grandiflora
Cagra.0381s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold381: 62569-67568 Capsella grandiflora
Cagra.0381s0011 10.0kb upstream 10.0kb upstream 12549 true Scaffold381: 67569-80117 Capsella grandiflora
Cagra.0381s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold381: 70118-80117 Capsella grandiflora
Cagra.0381s0011 10.0kb downstream 10.0kb downstream 12549 true Scaffold381: 57569-70117 Capsella grandiflora
Cagra.0381s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold381: 57569-67568 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369892 5261 Brassicaceae View MSA
123837291 5264 Brassicales-Malvales View MSA
124338265 5266 SBM View MSA
124250257 5268 Malvidae View MSA
124071742 5270 Rosid View MSA
123752422 5271 Pentapetalae View MSA
122797522 5272 Eudicot View MSA
122049366 5273 Angiosperm View MSA
121344195 5274 Embryophyte View MSA
123379996 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain