Gene : Cagra.0389s0014 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31062:SF47 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 21-RELATED Genomic Order:  14
Name:  ? Cagra.0389s0014 Secondary Identifier:  ? PAC:28916354
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0389s0014 0.5kb upstream 0.5kb upstream 1777 true Scaffold389: 54246-56022 Capsella grandiflora
Cagra.0389s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold389: 54246-54745 Capsella grandiflora
Cagra.0389s0014 0.5kb downstream 0.5kb downstream 1777 true Scaffold389: 54746-56522 Capsella grandiflora
Cagra.0389s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold389: 56023-56522 Capsella grandiflora
Cagra.0389s0014 1.0kb upstream 1.0kb upstream 2277 true Scaffold389: 53746-56022 Capsella grandiflora
Cagra.0389s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold389: 53746-54745 Capsella grandiflora
Cagra.0389s0014 1.0kb downstream 1.0kb downstream 2277 true Scaffold389: 54746-57022 Capsella grandiflora
Cagra.0389s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold389: 56023-57022 Capsella grandiflora
Cagra.0389s0014 2.0kb upstream 2.0kb upstream 3277 true Scaffold389: 52746-56022 Capsella grandiflora
Cagra.0389s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold389: 52746-54745 Capsella grandiflora
Cagra.0389s0014 2.0kb downstream 2.0kb downstream 3277 true Scaffold389: 54746-58022 Capsella grandiflora
Cagra.0389s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold389: 56023-58022 Capsella grandiflora
Cagra.0389s0014 5.0kb upstream 5.0kb upstream 6277 true Scaffold389: 49746-56022 Capsella grandiflora
Cagra.0389s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold389: 49746-54745 Capsella grandiflora
Cagra.0389s0014 5.0kb downstream 5.0kb downstream 3784 true Scaffold389: 54746-58529 Capsella grandiflora
Cagra.0389s0014 5.0kb downstream 5.0kb downstream 2507 false Scaffold389: 56023-58529 Capsella grandiflora
Cagra.0389s0014 10.0kb upstream 10.0kb upstream 11277 true Scaffold389: 44746-56022 Capsella grandiflora
Cagra.0389s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold389: 44746-54745 Capsella grandiflora
Cagra.0389s0014 10.0kb downstream 10.0kb downstream 3784 true Scaffold389: 54746-58529 Capsella grandiflora
Cagra.0389s0014 10.0kb downstream 10.0kb downstream 2507 false Scaffold389: 56023-58529 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372486 5261 Brassicaceae View MSA
123834969 5264 Brassicales-Malvales View MSA
124321981 5266 SBM View MSA
124251513 5268 Malvidae View MSA
124074397 5270 Rosid View MSA
123749278 5271 Pentapetalae View MSA
122796709 5272 Eudicot View MSA
122046395 5273 Angiosperm View MSA
121350333 5274 Embryophyte View MSA
123381682 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain