Gene : Cagra.0391s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31221:SF22 - WRKY TRANSCRIPTION FACTOR 3-RELATED Genomic Order:  9
Name:  ? Cagra.0391s0009 Secondary Identifier:  ? PAC:28906870
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0391s0009 0.5kb upstream 0.5kb upstream 3101 true Scaffold391: 20918-24018 Capsella grandiflora
Cagra.0391s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold391: 20918-21417 Capsella grandiflora
Cagra.0391s0009 0.5kb downstream 0.5kb downstream 3101 true Scaffold391: 21418-24518 Capsella grandiflora
Cagra.0391s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold391: 24019-24518 Capsella grandiflora
Cagra.0391s0009 1.0kb upstream 1.0kb upstream 3601 true Scaffold391: 20418-24018 Capsella grandiflora
Cagra.0391s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold391: 20418-21417 Capsella grandiflora
Cagra.0391s0009 1.0kb downstream 1.0kb downstream 3601 true Scaffold391: 21418-25018 Capsella grandiflora
Cagra.0391s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold391: 24019-25018 Capsella grandiflora
Cagra.0391s0009 2.0kb upstream 2.0kb upstream 4601 true Scaffold391: 19418-24018 Capsella grandiflora
Cagra.0391s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold391: 19418-21417 Capsella grandiflora
Cagra.0391s0009 2.0kb downstream 2.0kb downstream 4601 true Scaffold391: 21418-26018 Capsella grandiflora
Cagra.0391s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold391: 24019-26018 Capsella grandiflora
Cagra.0391s0009 5.0kb upstream 5.0kb upstream 7601 true Scaffold391: 16418-24018 Capsella grandiflora
Cagra.0391s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold391: 16418-21417 Capsella grandiflora
Cagra.0391s0009 5.0kb downstream 5.0kb downstream 7601 true Scaffold391: 21418-29018 Capsella grandiflora
Cagra.0391s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold391: 24019-29018 Capsella grandiflora
Cagra.0391s0009 10.0kb upstream 10.0kb upstream 12601 true Scaffold391: 11418-24018 Capsella grandiflora
Cagra.0391s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold391: 11418-21417 Capsella grandiflora
Cagra.0391s0009 10.0kb downstream 10.0kb downstream 10040 true Scaffold391: 21418-31457 Capsella grandiflora
Cagra.0391s0009 10.0kb downstream 10.0kb downstream 7439 false Scaffold391: 24019-31457 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378153 5261 Brassicaceae View MSA
123835692 5264 Brassicales-Malvales View MSA
124343983 5266 SBM View MSA
124253735 5268 Malvidae View MSA
124070868 5270 Rosid View MSA
123742422 5271 Pentapetalae View MSA
122788508 5272 Eudicot View MSA
122041677 5273 Angiosperm View MSA
121349380 5274 Embryophyte View MSA
123428268 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain