Gene : Cagra.0450s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10168:SF116 - GLUTAREDOXIN-C3 Genomic Order:  2
Name:  ? Cagra.0450s0002 Secondary Identifier:  ? PAC:28913159
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora THIOREDOX-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0450s0002 0.5kb upstream 0.5kb upstream 2217 true Scaffold450: 5828-8044 Capsella grandiflora
Cagra.0450s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold450: 7545-8044 Capsella grandiflora
Cagra.0450s0002 0.5kb downstream 0.5kb downstream 2217 true Scaffold450: 5328-7544 Capsella grandiflora
Cagra.0450s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold450: 5328-5827 Capsella grandiflora
Cagra.0450s0002 1.0kb upstream 1.0kb upstream 2717 true Scaffold450: 5828-8544 Capsella grandiflora
Cagra.0450s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold450: 7545-8544 Capsella grandiflora
Cagra.0450s0002 1.0kb downstream 1.0kb downstream 2717 true Scaffold450: 4828-7544 Capsella grandiflora
Cagra.0450s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold450: 4828-5827 Capsella grandiflora
Cagra.0450s0002 2.0kb upstream 2.0kb upstream 3717 true Scaffold450: 5828-9544 Capsella grandiflora
Cagra.0450s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold450: 7545-9544 Capsella grandiflora
Cagra.0450s0002 2.0kb downstream 2.0kb downstream 3717 true Scaffold450: 3828-7544 Capsella grandiflora
Cagra.0450s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold450: 3828-5827 Capsella grandiflora
Cagra.0450s0002 5.0kb upstream 5.0kb upstream 6717 true Scaffold450: 5828-12544 Capsella grandiflora
Cagra.0450s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold450: 7545-12544 Capsella grandiflora
Cagra.0450s0002 5.0kb downstream 5.0kb downstream 6717 true Scaffold450: 828-7544 Capsella grandiflora
Cagra.0450s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold450: 828-5827 Capsella grandiflora
Cagra.0450s0002 10.0kb upstream 10.0kb upstream 11717 true Scaffold450: 5828-17544 Capsella grandiflora
Cagra.0450s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold450: 7545-17544 Capsella grandiflora
Cagra.0450s0002 10.0kb downstream 10.0kb downstream 7544 true Scaffold450: 1-7544 Capsella grandiflora
Cagra.0450s0002 10.0kb downstream 10.0kb downstream 5827 false Scaffold450: 1-5827 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362973 5261 Brassicaceae View MSA
123832180 5264 Brassicales-Malvales View MSA
124338422 5266 SBM View MSA
124237581 5268 Malvidae View MSA
124064046 5270 Rosid View MSA
123741506 5271 Pentapetalae View MSA
122793687 5272 Eudicot View MSA
122043796 5273 Angiosperm View MSA
121344746 5274 Embryophyte View MSA
123428660 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain