Gene : Cagra.0352s0021 C. grandiflora v1.1
Defline:  (1 of 3) 2.7.7.79 - tRNA(His) guanylyltransferase / Histidine tRNA guanylyltransferase Genomic Order:  21
Name:  ? Cagra.0352s0021 Secondary Identifier:  ? PAC:28897317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0352s0021 0.5kb upstream 0.5kb upstream 4531 true Scaffold352: 78363-82893 Capsella grandiflora
Cagra.0352s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold352: 78363-78862 Capsella grandiflora
Cagra.0352s0021 0.5kb downstream 0.5kb downstream 4531 true Scaffold352: 78863-83393 Capsella grandiflora
Cagra.0352s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold352: 82894-83393 Capsella grandiflora
Cagra.0352s0021 1.0kb upstream 1.0kb upstream 5031 true Scaffold352: 77863-82893 Capsella grandiflora
Cagra.0352s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold352: 77863-78862 Capsella grandiflora
Cagra.0352s0021 1.0kb downstream 1.0kb downstream 5031 true Scaffold352: 78863-83893 Capsella grandiflora
Cagra.0352s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold352: 82894-83893 Capsella grandiflora
Cagra.0352s0021 2.0kb upstream 2.0kb upstream 6031 true Scaffold352: 76863-82893 Capsella grandiflora
Cagra.0352s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold352: 76863-78862 Capsella grandiflora
Cagra.0352s0021 2.0kb downstream 2.0kb downstream 6031 true Scaffold352: 78863-84893 Capsella grandiflora
Cagra.0352s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold352: 82894-84893 Capsella grandiflora
Cagra.0352s0021 5.0kb upstream 5.0kb upstream 9031 true Scaffold352: 73863-82893 Capsella grandiflora
Cagra.0352s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold352: 73863-78862 Capsella grandiflora
Cagra.0352s0021 5.0kb downstream 5.0kb downstream 9031 true Scaffold352: 78863-87893 Capsella grandiflora
Cagra.0352s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold352: 82894-87893 Capsella grandiflora
Cagra.0352s0021 10.0kb upstream 10.0kb upstream 14031 true Scaffold352: 68863-82893 Capsella grandiflora
Cagra.0352s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold352: 68863-78862 Capsella grandiflora
Cagra.0352s0021 10.0kb downstream 10.0kb downstream 14031 true Scaffold352: 78863-92893 Capsella grandiflora
Cagra.0352s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold352: 82894-92893 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122333593 5261 Brassicaceae Singleton cluster - no MSA
123774521 5264 Brassicales-Malvales Singleton cluster - no MSA
124272956 5266 SBM Singleton cluster - no MSA
124250118 5268 Malvidae View MSA
124039851 5270 Rosid View MSA
123748870 5271 Pentapetalae View MSA
122795509 5272 Eudicot View MSA
122049753 5273 Angiosperm View MSA
121349209 5274 Embryophyte View MSA
123426197 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain