Gene : Cagra.0352s0029 C. grandiflora v1.1
Defline:  (1 of 12) PTHR10953 - UBIQUITIN-ACTIVATING ENZYME E1 Genomic Order:  29
Name:  ? Cagra.0352s0029 Secondary Identifier:  ? PAC:28897298
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0352s0029 0.5kb upstream 0.5kb upstream 4080 true Scaffold352: 108786-112865 Capsella grandiflora
Cagra.0352s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold352: 108786-109285 Capsella grandiflora
Cagra.0352s0029 0.5kb downstream 0.5kb downstream 4080 true Scaffold352: 109286-113365 Capsella grandiflora
Cagra.0352s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold352: 112866-113365 Capsella grandiflora
Cagra.0352s0029 1.0kb upstream 1.0kb upstream 4580 true Scaffold352: 108286-112865 Capsella grandiflora
Cagra.0352s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold352: 108286-109285 Capsella grandiflora
Cagra.0352s0029 1.0kb downstream 1.0kb downstream 4580 true Scaffold352: 109286-113865 Capsella grandiflora
Cagra.0352s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold352: 112866-113865 Capsella grandiflora
Cagra.0352s0029 2.0kb upstream 2.0kb upstream 5580 true Scaffold352: 107286-112865 Capsella grandiflora
Cagra.0352s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold352: 107286-109285 Capsella grandiflora
Cagra.0352s0029 2.0kb downstream 2.0kb downstream 5580 true Scaffold352: 109286-114865 Capsella grandiflora
Cagra.0352s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold352: 112866-114865 Capsella grandiflora
Cagra.0352s0029 5.0kb upstream 5.0kb upstream 8580 true Scaffold352: 104286-112865 Capsella grandiflora
Cagra.0352s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold352: 104286-109285 Capsella grandiflora
Cagra.0352s0029 5.0kb downstream 5.0kb downstream 8580 true Scaffold352: 109286-117865 Capsella grandiflora
Cagra.0352s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold352: 112866-117865 Capsella grandiflora
Cagra.0352s0029 10.0kb upstream 10.0kb upstream 13580 true Scaffold352: 99286-112865 Capsella grandiflora
Cagra.0352s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold352: 99286-109285 Capsella grandiflora
Cagra.0352s0029 10.0kb downstream 10.0kb downstream 13580 true Scaffold352: 109286-122865 Capsella grandiflora
Cagra.0352s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold352: 112866-122865 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121510235 5273 Angiosperm View MSA
122360916 5261 Brassicaceae View MSA
123798061 5264 Brassicales-Malvales View MSA
124295741 5266 SBM View MSA
124148093 5268 Malvidae View MSA
123874163 5270 Rosid View MSA
123458179 5271 Pentapetalae View MSA
122493589 5272 Eudicot View MSA
121347842 5274 Embryophyte View MSA
123426326 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain