Gene : Cagra.0380s0001 C. grandiflora v1.1
Defline:  (1 of 27) PF13837 - Myb/SANT-like DNA-binding domain (Myb_DNA-bind_4) Genomic Order:  1
Name:  ? Cagra.0380s0001 Secondary Identifier:  ? PAC:28902115
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0001 0.5kb upstream 0.5kb upstream 2086 true Scaffold380: 1-2086 Capsella grandiflora
Cagra.0380s0001 0.5kb upstream 0.5kb upstream 391 false Scaffold380: 1-391 Capsella grandiflora
Cagra.0380s0001 0.5kb downstream 0.5kb downstream 2195 true Scaffold380: 392-2586 Capsella grandiflora
Cagra.0380s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 2087-2586 Capsella grandiflora
Cagra.0380s0001 1.0kb upstream 1.0kb upstream 2086 true Scaffold380: 1-2086 Capsella grandiflora
Cagra.0380s0001 1.0kb upstream 1.0kb upstream 391 false Scaffold380: 1-391 Capsella grandiflora
Cagra.0380s0001 1.0kb downstream 1.0kb downstream 2695 true Scaffold380: 392-3086 Capsella grandiflora
Cagra.0380s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 2087-3086 Capsella grandiflora
Cagra.0380s0001 2.0kb upstream 2.0kb upstream 2086 true Scaffold380: 1-2086 Capsella grandiflora
Cagra.0380s0001 2.0kb upstream 2.0kb upstream 391 false Scaffold380: 1-391 Capsella grandiflora
Cagra.0380s0001 2.0kb downstream 2.0kb downstream 3695 true Scaffold380: 392-4086 Capsella grandiflora
Cagra.0380s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 2087-4086 Capsella grandiflora
Cagra.0380s0001 5.0kb upstream 5.0kb upstream 2086 true Scaffold380: 1-2086 Capsella grandiflora
Cagra.0380s0001 5.0kb upstream 5.0kb upstream 391 false Scaffold380: 1-391 Capsella grandiflora
Cagra.0380s0001 5.0kb downstream 5.0kb downstream 6695 true Scaffold380: 392-7086 Capsella grandiflora
Cagra.0380s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 2087-7086 Capsella grandiflora
Cagra.0380s0001 10.0kb upstream 10.0kb upstream 2086 true Scaffold380: 1-2086 Capsella grandiflora
Cagra.0380s0001 10.0kb upstream 10.0kb upstream 391 false Scaffold380: 1-391 Capsella grandiflora
Cagra.0380s0001 10.0kb downstream 10.0kb downstream 11695 true Scaffold380: 392-12086 Capsella grandiflora
Cagra.0380s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 2087-12086 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370349 5261 Brassicaceae View MSA
123837770 5264 Brassicales-Malvales View MSA
124347352 5266 SBM View MSA
124253271 5268 Malvidae View MSA
124072606 5270 Rosid View MSA
123744307 5271 Pentapetalae View MSA
122795013 5272 Eudicot View MSA
122048158 5273 Angiosperm View MSA
121351140 5274 Embryophyte View MSA
123382022 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain