Gene : Cagra.0380s0014 C. grandiflora v1.1
Defline:  (1 of 4) PF09366 - Protein of unknown function (DUF1997) (DUF1997) Genomic Order:  14
Name:  ? Cagra.0380s0014 Secondary Identifier:  ? PAC:28902151
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0014 0.5kb upstream 0.5kb upstream 2679 true Scaffold380: 50114-52792 Capsella grandiflora
Cagra.0380s0014 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 52293-52792 Capsella grandiflora
Cagra.0380s0014 0.5kb downstream 0.5kb downstream 2679 true Scaffold380: 49614-52292 Capsella grandiflora
Cagra.0380s0014 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 49614-50113 Capsella grandiflora
Cagra.0380s0014 1.0kb upstream 1.0kb upstream 3179 true Scaffold380: 50114-53292 Capsella grandiflora
Cagra.0380s0014 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 52293-53292 Capsella grandiflora
Cagra.0380s0014 1.0kb downstream 1.0kb downstream 3179 true Scaffold380: 49114-52292 Capsella grandiflora
Cagra.0380s0014 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 49114-50113 Capsella grandiflora
Cagra.0380s0014 2.0kb upstream 2.0kb upstream 4179 true Scaffold380: 50114-54292 Capsella grandiflora
Cagra.0380s0014 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 52293-54292 Capsella grandiflora
Cagra.0380s0014 2.0kb downstream 2.0kb downstream 4179 true Scaffold380: 48114-52292 Capsella grandiflora
Cagra.0380s0014 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 48114-50113 Capsella grandiflora
Cagra.0380s0014 5.0kb upstream 5.0kb upstream 7179 true Scaffold380: 50114-57292 Capsella grandiflora
Cagra.0380s0014 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 52293-57292 Capsella grandiflora
Cagra.0380s0014 5.0kb downstream 5.0kb downstream 7179 true Scaffold380: 45114-52292 Capsella grandiflora
Cagra.0380s0014 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 45114-50113 Capsella grandiflora
Cagra.0380s0014 10.0kb upstream 10.0kb upstream 12179 true Scaffold380: 50114-62292 Capsella grandiflora
Cagra.0380s0014 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 52293-62292 Capsella grandiflora
Cagra.0380s0014 10.0kb downstream 10.0kb downstream 12179 true Scaffold380: 40114-52292 Capsella grandiflora
Cagra.0380s0014 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 40114-50113 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361426 5261 Brassicaceae View MSA
123833895 5264 Brassicales-Malvales View MSA
124344679 5266 SBM View MSA
124240379 5268 Malvidae View MSA
124068915 5270 Rosid View MSA
123740182 5271 Pentapetalae View MSA
122791833 5272 Eudicot View MSA
122045233 5273 Angiosperm View MSA
121346827 5274 Embryophyte View MSA
123423879 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain