Gene : Cagra.0380s0012 C. grandiflora v1.1
Defline:  (1 of 15) PF06749 - Protein of unknown function (DUF1218) (DUF1218) Genomic Order:  12
Name:  ? Cagra.0380s0012 Secondary Identifier:  ? PAC:28902099
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0380s0012 0.5kb upstream 0.5kb upstream 2332 true Scaffold380: 42995-45326 Capsella grandiflora
Cagra.0380s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold380: 42995-43494 Capsella grandiflora
Cagra.0380s0012 0.5kb downstream 0.5kb downstream 2332 true Scaffold380: 43495-45826 Capsella grandiflora
Cagra.0380s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold380: 45327-45826 Capsella grandiflora
Cagra.0380s0012 1.0kb upstream 1.0kb upstream 2832 true Scaffold380: 42495-45326 Capsella grandiflora
Cagra.0380s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold380: 42495-43494 Capsella grandiflora
Cagra.0380s0012 1.0kb downstream 1.0kb downstream 2832 true Scaffold380: 43495-46326 Capsella grandiflora
Cagra.0380s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold380: 45327-46326 Capsella grandiflora
Cagra.0380s0012 2.0kb upstream 2.0kb upstream 3832 true Scaffold380: 41495-45326 Capsella grandiflora
Cagra.0380s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold380: 41495-43494 Capsella grandiflora
Cagra.0380s0012 2.0kb downstream 2.0kb downstream 3832 true Scaffold380: 43495-47326 Capsella grandiflora
Cagra.0380s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold380: 45327-47326 Capsella grandiflora
Cagra.0380s0012 5.0kb upstream 5.0kb upstream 6832 true Scaffold380: 38495-45326 Capsella grandiflora
Cagra.0380s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold380: 38495-43494 Capsella grandiflora
Cagra.0380s0012 5.0kb downstream 5.0kb downstream 6832 true Scaffold380: 43495-50326 Capsella grandiflora
Cagra.0380s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold380: 45327-50326 Capsella grandiflora
Cagra.0380s0012 10.0kb upstream 10.0kb upstream 11832 true Scaffold380: 33495-45326 Capsella grandiflora
Cagra.0380s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold380: 33495-43494 Capsella grandiflora
Cagra.0380s0012 10.0kb downstream 10.0kb downstream 11832 true Scaffold380: 43495-55326 Capsella grandiflora
Cagra.0380s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold380: 45327-55326 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041222 5273 Angiosperm View MSA
122377068 5261 Brassicaceae View MSA
123837287 5264 Brassicales-Malvales View MSA
124345997 5266 SBM View MSA
124238354 5268 Malvidae View MSA
124061331 5270 Rosid View MSA
123737344 5271 Pentapetalae View MSA
122792572 5272 Eudicot View MSA
121350312 5274 Embryophyte View MSA
123381673 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain