Gene : Cagra.0338s0018 C. grandiflora v1.1
Defline:  (1 of 2) PTHR34549:SF2 - PHOTOSYSTEM I REACTION CENTER SUBUNIT IV A, CHLOROPLASTIC-RELATED Genomic Order:  18
Name:  ? Cagra.0338s0018 Secondary Identifier:  ? PAC:28902984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0338s0018 0.5kb upstream 0.5kb upstream 1571 true Scaffold338: 81866-83436 Capsella grandiflora
Cagra.0338s0018 0.5kb upstream 0.5kb upstream 500 false Scaffold338: 81866-82365 Capsella grandiflora
Cagra.0338s0018 0.5kb downstream 0.5kb downstream 1571 true Scaffold338: 82366-83936 Capsella grandiflora
Cagra.0338s0018 0.5kb downstream 0.5kb downstream 500 false Scaffold338: 83437-83936 Capsella grandiflora
Cagra.0338s0018 1.0kb upstream 1.0kb upstream 2071 true Scaffold338: 81366-83436 Capsella grandiflora
Cagra.0338s0018 1.0kb upstream 1.0kb upstream 1000 false Scaffold338: 81366-82365 Capsella grandiflora
Cagra.0338s0018 1.0kb downstream 1.0kb downstream 2071 true Scaffold338: 82366-84436 Capsella grandiflora
Cagra.0338s0018 1.0kb downstream 1.0kb downstream 1000 false Scaffold338: 83437-84436 Capsella grandiflora
Cagra.0338s0018 2.0kb upstream 2.0kb upstream 3071 true Scaffold338: 80366-83436 Capsella grandiflora
Cagra.0338s0018 2.0kb upstream 2.0kb upstream 2000 false Scaffold338: 80366-82365 Capsella grandiflora
Cagra.0338s0018 2.0kb downstream 2.0kb downstream 3071 true Scaffold338: 82366-85436 Capsella grandiflora
Cagra.0338s0018 2.0kb downstream 2.0kb downstream 2000 false Scaffold338: 83437-85436 Capsella grandiflora
Cagra.0338s0018 5.0kb upstream 5.0kb upstream 6071 true Scaffold338: 77366-83436 Capsella grandiflora
Cagra.0338s0018 5.0kb upstream 5.0kb upstream 5000 false Scaffold338: 77366-82365 Capsella grandiflora
Cagra.0338s0018 5.0kb downstream 5.0kb downstream 6071 true Scaffold338: 82366-88436 Capsella grandiflora
Cagra.0338s0018 5.0kb downstream 5.0kb downstream 5000 false Scaffold338: 83437-88436 Capsella grandiflora
Cagra.0338s0018 10.0kb upstream 10.0kb upstream 11071 true Scaffold338: 72366-83436 Capsella grandiflora
Cagra.0338s0018 10.0kb upstream 10.0kb upstream 10000 false Scaffold338: 72366-82365 Capsella grandiflora
Cagra.0338s0018 10.0kb downstream 10.0kb downstream 11071 true Scaffold338: 82366-93436 Capsella grandiflora
Cagra.0338s0018 10.0kb downstream 10.0kb downstream 10000 false Scaffold338: 83437-93436 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377467 5261 Brassicaceae View MSA
123840896 5264 Brassicales-Malvales View MSA
124339470 5266 SBM View MSA
124244630 5268 Malvidae View MSA
124068589 5270 Rosid View MSA
123747276 5271 Pentapetalae View MSA
122791001 5272 Eudicot View MSA
122047877 5273 Angiosperm View MSA
121348572 5274 Embryophyte View MSA
123426677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain